RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SOX3P41225 446 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 HNF4AP41235 474 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 AVPR1BP47901 424 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MAN2A2P49641 1150 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 HLCSP50747 726 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TERF1P54274 439 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MLF1P58340 268 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 EIF3EP60228 445 aaKnown RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 AP2B1P63010 937 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 BTG2P78543 158 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CRADDP78560 199 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 DMTNQ08495 405 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 GTF3C1Q12789 2109 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MSLNQ13421 630 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 PRPSAP1Q14558 356 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ITIH4Q14624 930 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 KCNJ11Q14654 390 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ZNF750Q32MQ0 723 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 SLC25A35Q3KQZ1 300 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 KRTAP24-1Q3LI83 254 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 GPR33Q49SQ1 333 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 FILIP1LQ4L180 1135 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CTSL3PQ5NE16 218 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ANKRD20A2Q5SQ80 823 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 THEMIS2Q5TEJ8 643 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ANKRD20A1Q5TYW2 823 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PRAMEF20Q5VT98 475 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ANKRD20A3Q5VUR7 823 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ICE2Q659A1 982 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PTRHD1Q6GMV3 140 aaKnown RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 ITPRIPL1Q6GPH6 555 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 H3F3CQ6NXT2 135 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 LETMD1Q6P1Q0 360 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 FBXO42Q6P3S6 717 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 AFTPHQ6ULP2 937 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 IL20RBQ6UXL0 311 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 RANBP10Q6VN20 620 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PACS1Q6VY07 963 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MBOAT1Q6ZNC8 495 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ZNF534Q76KX8 674 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TRILQ7L0X0 811 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CLNKQ7Z7G1 428 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 LUZP2Q86TE4 346 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PRUNE1Q86TP1 453 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CREG2Q8IUH2 290 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 LGI4Q8N135 537 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TMEM156Q8N614 296 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TMEM251Q8N6I4 163 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PSD4Q8NDX1 1056 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 SIMC1Q8NDZ2 872 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MYRIPQ8NFW9 859 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TNIP2Q8NFZ5 429 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 OR2M7Q8NG81 312 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 OR52K1Q8NGK4 314 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 OR13J1Q8NGT2 312 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 GSDMBQ8TAX9 411 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 M1APQ8TC57 530 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PIWIL2Q8TC59 973 aaKnown RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 ACTL9Q8TC94 416 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 EPS8L3Q8TE67 593 aaKnown RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 DOK4Q8TEW6 326 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 FAM222BQ8WU58 562 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 HEXDCQ8WVB3 486 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 KRT35Q92764 455 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 P3H4Q92791 437 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CDKN2AIPNLQ96HQ2 116 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PDLIM2Q96JY6 352 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 JSRP1Q96MG2 331 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 OR2A5Q96R48 311 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PKP4Q99569 1192 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CCL19Q99731 98 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 RAB11FIP5Q9BXF6 653 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TGIF2Q9GZN2 237 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 LDAHQ9H6V9 325 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 SEMA4BQ9NPR2 832 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 NECTIN3Q9NQS3 549 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 PNO1Q9NRX1 252 aaKnown RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 LANCL2Q9NS86 450 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 TUBA8Q9NY65 449 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 IL1RAPL1Q9NZN1 696 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 GALPQ9UBC7 116 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ZNF223Q9UK11 482 aaPredicted RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 ACAD8Q9UKU7 415 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 MYO6Q9UM54 1294 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 NENFQ9UMX5 172 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 NAALAD2Q9Y3Q0 740 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 SEC16AO15027 2179 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 RTTNQ86VV8 2226 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 CHD3Q12873 2000 aaKnown RBP3.36□□□□□ -1.87
USP46-205ENST00000504078 SCN2AQ99250 2005 aa3.36□□□□□ -1.87
USP46-205ENST00000504078 ANK3Q12955 4377 aaKnown RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 CSPG4Q6UVK1 2322 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 A0A087X1B8 175 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 C15orf38-AP3S2A0A0A6YYH1 394 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 CTAGE15A4D2H0 777 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 SH3D21A4FU49 640 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 MBD3L4A6NDZ8 208 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 MBD3L5A6NJ08 208 aaPredicted RBP3.35□□□□□ -1.87
USP46-205ENST00000504078 A8MVJ9 347 aa3.35□□□□□ -1.87
USP46-205ENST00000504078 FAM171A2A8MVW0 826 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms