RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 LRFN1Q9P244 771 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 COPG2Q9UBF2 871 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 ENTPD4Q9Y227 616 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 MRPS33Q9Y291 106 aaKnown RBP11.2□□□□□ -0.62
MED28-203ENST00000503945 ACOT9Q9Y305 439 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 MMACHCQ9Y4U1 282 aa11.2□□□□□ -0.62
MED28-203ENST00000503945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.2□□□□□ -0.62
MED28-203ENST00000503945 TRGV8A0A0C4DH27 118 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 FCHO1O14526 889 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 MAN1A2O60476 641 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 FAM155BO75949 473 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 ST13P50502 369 aaKnown RBP11.19□□□□□ -0.62
MED28-203ENST00000503945 CLCN2P51788 898 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 TDGF1P3P51864 188 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 ALDH6A1Q02252 535 aaKnown RBP11.19□□□□□ -0.62
MED28-203ENST00000503945 SRSF11Q05519 484 aaKnown RBP11.19□□□□□ -0.62
MED28-203ENST00000503945 CHIT1Q13231 466 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 DOC2AQ14183 400 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 EFTUD2Q15029 972 aaKnown RBP eCLIP11.19□□□□□ -0.62
MED28-203ENST00000503945 ZKSCAN8Q15776 578 aaPredicted RBP11.19□□□□□ -0.62
MED28-203ENST00000503945 TBCCQ15814 346 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 FBXO48Q5FWF7 155 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 CHSY3Q70JA7 882 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.19□□□□□ -0.62
MED28-203ENST00000503945 C17orf53Q8N3J3 647 aaPredicted RBP11.19□□□□□ -0.62
MED28-203ENST00000503945 MDS2Q8NDY4 140 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 TMEM125Q96AQ2 219 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 WDR34Q96EX3 536 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 SERINC2Q96SA4 455 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 NPAS2Q99743 824 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 EFCAB11Q9BUY7 163 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 ROGDIQ9GZN7 287 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 ALG9Q9H6U8 611 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 NECTIN3Q9NQS3 549 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 SCN3AQ9NY46 2000 aa11.19□□□□□ -0.62
MED28-203ENST00000503945 IGKV3D-11A0A0A0MRZ8 115 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 A0A0G2JN53 185 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 SAGE2PA6NJ88 616 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 PRSS44E7EML9 344 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 CCL21O00585 134 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 CTNSO60931 367 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 MYO1DO94832 1006 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 LTA4HP09960 611 aaKnown RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 CASP2P42575 452 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 MTTPP55157 894 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 RAB38P57729 211 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 MLF1P58340 268 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 SLC7A5Q01650 507 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 CKAP4Q07065 602 aaKnown RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 NAB1Q13506 487 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 BMPR2Q13873 1038 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 SLMAPQ14BN4 828 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 MTFR2Q6P444 385 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 ABHD17CQ6PCB6 329 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 GALNTL5Q7Z4T8 443 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 CCDC91Q7Z6B0 441 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 ZNF595Q8IYB9 648 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 KIF2BQ8N4N8 673 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 TMEM156Q8N614 296 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 PDPRQ8NCN5 879 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 C7orf57Q8NEG2 295 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 NFAM1Q8NET5 270 aaPredicted RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 B3GNT7Q8NFL0 401 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 ADAMTS18Q8TE60 1221 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 THAP3Q8WTV1 239 aaPredicted RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 EXT2Q93063 718 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 SCMH1Q96GD3 660 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 F2RL3Q96RI0 385 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 CCDC77Q9BR77 488 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 TMEM79Q9BSE2 394 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 AICDAQ9GZX7 198 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 COPS7BQ9H9Q2 264 aaPredicted RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 PRDM7Q9NQW5 492 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 SUCOQ9UBS9 1254 aaKnown RBP11.18□□□□□ -0.62
MED28-203ENST00000503945 ADGRE2Q9UHX3 823 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 FBXW2Q9UKT8 454 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 CLCA3PQ9Y6N3 262 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 PDZD2O15018 2839 aa11.18□□□□□ -0.62
MED28-203ENST00000503945 A0A087X1B8 175 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 SYNDIG1LA6NDD5 238 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 SYCE1LA8MT33 242 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 SUPT3HB4E1H0 165 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 NPIPA5E9PKD4 350 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 KLRC4-KLRK1H3BQV0 150 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 SUPT3HO75486 399 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 SLC25A12O75746 678 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 NEURL1O76050 574 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 C1QAP02745 245 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 IFNA16P05015 189 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 SLC35E2BP0CK96 405 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 ESRRAP11474 423 aaPredicted RBP11.17□□□□□ -0.62
MED28-203ENST00000503945 EPB42P16452 691 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 TNNI3P19429 210 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 TFEBP19484 476 aa11.17□□□□□ -0.62
MED28-203ENST00000503945 GRNP28799 593 aaKnown RBP11.17□□□□□ -0.62
MED28-203ENST00000503945 TPP2P29144 1249 aaPredicted RBP11.17□□□□□ -0.62
MED28-203ENST00000503945 TRHRP34981 398 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms