RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TBC1D20Q96BZ9 403 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 TOE1Q96GM8 510 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 GAS2L1Q99501 681 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 ASPSCR1Q9BZE9 553 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 EPS8L2Q9H6S3 715 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 SLAMF7Q9NQ25 335 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 C1GALT1Q9NS00 363 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 RAPGEFL1Q9UHV5 662 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 ACSL6Q9UKU0 697 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 SNX7Q9UNH6 387 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 CYP8B1Q9UNU6 501 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 PCDHGA4Q9Y5G9 962 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 MDC1Q14676 2089 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 ISM1B1AKI9 464 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 CHURC1-FNTBB4DL54 471 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 BTN3A3O00478 584 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 AHCYL1O43865 530 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 GCM2O75603 506 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 SNAP29O95721 258 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 FESP07332 822 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 ETFAP13804 333 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 CAPGP40121 348 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 CRATP43155 626 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 PLA2G16P53816 162 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 PCBP4P57723 403 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 ADARB1P78563 741 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 SPIDRQ14159 915 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 TEAD4Q15561 434 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 SLC5A12Q1EHB4 618 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 KRT80Q6KB66 452 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 OR5P2Q8WZ92 322 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 MS4A6EQ96DS6 147 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 SYNPO2LQ9H987 977 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 C2orf42Q9NWW7 574 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 TEX10Q9NXF1 929 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 PADI4Q9UM07 663 aa20.32■□□□□ 0.84
UBE2D3-216ENST00000503742 MYOCOSA0A1B0GUC4 107 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 GNGT2O14610 69 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 DDX5P17844 614 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 UQCRC2P22695 453 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 ARFIP1P53367 373 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 RBBP4Q09028 425 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 SMAD2Q15796 467 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 USP51Q70EK9 711 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 PAQR7Q86WK9 346 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 TBC1D19Q8N5T2 526 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 MFSD9Q8NBP5 474 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 OR5K1Q8NHB7 308 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 FLVCR1-AS1Q8TAF5 88 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 TRAPPC9Q96Q05 1148 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 C17orf62Q9BQA9 187 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 TMEM38AQ9H6F2 299 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 CXorf36Q9H7Y0 433 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 WSB2Q9NYS7 404 aaPredicted RBP20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 USE1Q9NZ43 259 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 DMTF1Q9Y222 760 aa20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 ARHGEF17Q96PE2 2063 aaPredicted RBP20.31■□□□□ 0.84
UBE2D3-216ENST00000503742 TRBV23OR9-2A0A075B6M9 112 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 C4orf51C9J302 202 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 KRT75O95678 551 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 DCTP40126 519 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 SSR2P43308 183 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 PPP2R2BQ00005 443 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 APOFQ13790 326 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 GCNT6Q5T4J0 391 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 FAM180BQ6P0A1 224 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 VTCN1Q7Z7D3 282 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 TMEM179BQ7Z7N9 219 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 GPBAR1Q8TDU6 330 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 CYGBQ8WWM9 190 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 HSH2DQ96JZ2 352 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 OSBPL10Q9BXB5 764 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 MRPS26Q9BYN8 205 aaKnown RBP20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 FAM192AQ9GZU8 254 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 SRMSQ9H3Y6 488 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 RAD21L1Q9H4I0 556 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 CAAP1Q9H8G2 361 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 GPR27Q9NS67 375 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 TAS2R7Q9NYW3 318 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 KLHL20Q9Y2M5 609 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 A0A0G2JN53 185 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 TMEM229AB2RXF0 380 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 H0YAE9 185 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 H3BNH8 94 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 PDPK1O15530 556 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 H6PDO95479 791 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 TNFP01375 233 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 CHI3L1P36222 383 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 ALDH9A1P49189 494 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 EEF1A2Q05639 463 aaKnown RBP20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 CCDC85BQ15834 202 aaPredicted RBP20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 TRIM40Q6P9F5 258 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 ABHD17CQ6PCB6 329 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 ANGPTL8Q6UXH0 198 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 RNF130Q86XS8 419 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 OR5AK3PQ8NH89 298 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 RDH12Q96NR8 316 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 MACROD1Q9BQ69 325 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 YIPF3Q9GZM5 350 aa20.3■□□□□ 0.84
UBE2D3-216ENST00000503742 PRDM7Q9NQW5 492 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms