RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 BTRCQ9Y297 605 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PCDHA11Q9Y5I1 949 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ERVH48-1M5A8F1 160 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ADAMDEC1O15204 470 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SIGLEC6O43699 453 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HS6ST1O60243 411 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HUS1O60921 280 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CPNE3O75131 537 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 BANF1O75531 89 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CHRM5P08912 532 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 LTA4HP09960 611 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CD247P20963 164 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 DNASE1P24855 282 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TAS2R40P59535 323 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZXDBP98169 803 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 NME3Q13232 169 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HNF4GQ14541 408 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF267Q14586 743 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SF3A2Q15428 464 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 DNLZQ5SXM8 178 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TREML2Q5T2D2 321 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PSAPL1Q6NUJ1 521 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SCYL2Q6P3W7 929 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 BLOC1S3Q6QNY0 202 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 BAIAP2L2Q6UXY1 529 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 VN1R5Q7Z5H4 357 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 FGD2Q7Z6J4 655 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GAPTQ8N292 157 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CAMKK1Q8N5S9 505 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TTLQ8NG68 377 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 OR5B17Q8NGF7 314 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 FAR1Q8WVX9 515 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GTF2H4Q92759 462 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 RBPMSQ93062 196 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 YIPF5Q969M3 257 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 KIAA1191Q96A73 305 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 INTS12Q96CB8 462 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TAAR1Q96RJ0 339 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PARK7Q99497 189 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 UTP23Q9BRU9 249 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CDADC1Q9BWV3 514 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 C1QTNF2Q9BXJ5 285 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM121BQ9BXQ6 578 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 UCK2Q9BZX2 261 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 XKR8Q9H6D3 395 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SMURF2Q9HAU4 748 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PRMT8Q9NR22 394 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 INTS7Q9NVH2 962 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CCDC167Q9P0B6 97 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SCP2D1Q9UJQ7 156 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SPATA2Q9UM82 520 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SSR3Q9UNL2 185 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 MRPS7Q9Y2R9 242 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PCDHGA7Q9Y5G6 932 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GLYATL1P3A0A0U1RQE8 302 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CCDC195A0A1B0GUA6 201 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PSMD9O00233 223 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GSTA4O15217 222 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ANXA9O76027 345 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 DXOO77932 396 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CRYABP02511 175 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PROS1P07225 676 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HOXB2P14652 356 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GPX2P18283 190 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 AKAP5P24588 427 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 HTR1BP28222 390 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GRIA4P48058 902 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 LIPEQ05469 1076 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 AQP6Q13520 282 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 KCNAB1Q14722 419 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF169Q14929 603 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PDSS1Q5T2R2 415 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PXDC1Q5TGL8 231 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ANKRD22Q5VYY1 191 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF529Q6P280 563 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZCCHC23Q6ZST2 131 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM17Q86X19 198 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 C10orf107Q8IVU9 208 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SLC44A2Q8IWA5 706 aaPredicted RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 RDH10Q8IZV5 341 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 EID2Q8N6I1 236 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SLC39A7Q92504 469 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CXorf40BQ96DE9 158 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 QRFPRQ96P65 431 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 PEBP4Q96S96 227 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 WACQ9BTA9 647 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 NTMT1Q9BV86 223 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 SGPP1Q9BX95 441 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ZDHHC5Q9C0B5 715 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 NCOR1P1Q9H4R4 102 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 NMUR1Q9HB89 426 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 EXOSC4Q9NPD3 245 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 ISYNA1Q9NPH2 558 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 TLR9Q9NR96 1032 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 FAM118AQ9NWS6 357 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 GMPR2Q9P2T1 348 aaKnown RBP2.67□□□□□ -1.98
NEDD4-204ENST00000503468 V9GYQ6 96 aa2.67□□□□□ -1.98
NEDD4-204ENST00000503468 CEP250Q9BV73 2442 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms