RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 THSD1Q9NS62 852 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 TAAR2Q9P1P5 351 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 PSORS1C1Q9UIG5 152 aa9.43□□□□□ -0.9
CLIP1-204ENST00000501271 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLIP1-204ENST00000501271 A0A1W2PRB8 838 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SLC9A3R1O14745 358 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 RECKO95980 971 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SLC6A11P48066 632 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 IDH2P48735 452 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 BCAP31P51572 246 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 NUDT6P53370 316 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PCBP3P57721 371 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 IFITM3Q01628 133 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SYT16Q17RD7 645 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PRAMEF14Q5SWL7 426 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 C9orf64Q5T6V5 341 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PRAMEF13Q5VWM6 474 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 TRIM40Q6P9F5 258 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ADCK1Q86TW2 530 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 DNAJC22Q8N4W6 341 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 OR5AR1Q8NGP9 310 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 OR6Q1Q8NGQ2 317 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 WFIKKN2Q8TEU8 576 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 LGALS12Q96DT0 336 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PAWRQ96IZ0 340 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ZFYVE19Q96K21 471 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 LINC00615Q96LM1 132 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ACAT2Q9BWD1 397 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ITPAQ9BY32 194 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SLIRPQ9GZT3 109 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 FBXO8Q9NRD0 319 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF226Q9NYT6 803 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PNMA8BQ9ULN7 279 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 POFUT2Q9Y2G5 429 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 CLDN24A6NM45 220 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 M0R082 166 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PCDH17O14917 1159 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 KIAA0355O15063 1070 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 LZTS3O60299 673 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 TBX6O95947 436 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ARAFP10398 606 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ANXA8P13928 327 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ADRB3P13945 408 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 GABRB1P18505 474 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 TPP2P29144 1249 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 RPL3P39023 403 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PIK3CBP42338 1070 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 XCR1P46094 333 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ELOAQ14241 798 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 GANABQ14697 944 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 FNDC3BQ53EP0 1204 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 CRB2Q5IJ48 1285 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PERM1Q5SV97 790 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 TMIGD1Q6UXZ0 262 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF765Q7L2R6 523 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 OR2L2Q8NH16 312 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 RHOXF1Q8NHV9 184 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PHF10Q8WUB8 498 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 GEMIN6Q8WXD5 167 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 GGHQ92820 318 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 OR52A5Q9H2C5 316 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 DPEP2Q9H4A9 486 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 CXorf36Q9H7Y0 433 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ZBTB20Q9HC78 741 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 PLCXD1Q9NUJ7 323 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 FKBP14Q9NWM8 211 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 GPR83Q9NYM4 423 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 DAPK2Q9UIK4 370 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 OSGIN1Q9UJX0 560 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SLC6A14Q9UN76 642 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 ASF1AQ9Y294 204 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SLC27A6Q9Y2P4 619 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 TMEM98Q9Y2Y6 226 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 SH3GLB1Q9Y371 365 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 INSL6Q9Y581 213 aa9.42□□□□□ -0.9
CLIP1-204ENST00000501271 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
CLIP1-204ENST00000501271 DOCK9Q9BZ29 2069 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 NUMA1Q14980 2115 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 OTOL1A6NHN0 477 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 CLCA1A8K7I4 914 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 EFCAB9A8MZ26 197 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 PLPP1O14494 284 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 HOXC11O43248 304 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 CDK1P06493 297 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 POU2F1P14859 743 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 VIPR2P41587 438 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 LIMS1P48059 325 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 SERPINB10P48595 397 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 RPS26P62854 115 aaKnown RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 CSNK2BP67870 215 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ELP6Q0PNE2 266 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 FOXD4Q12950 439 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 OXA1LQ15070 435 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 TBCEQ15813 527 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 INAQ16352 499 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF630Q2M218 657 aaPredicted RBP9.41□□□□□ -0.9
CLIP1-204ENST00000501271 NIPAL1Q6NVV3 410 aa9.41□□□□□ -0.9
CLIP1-204ENST00000501271 ZNF605Q86T29 641 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms