RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 APH1BQ8WW43 257 aa5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 MRPL48Q96GC5 212 aaKnown RBP5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 NPY6RQ99463 290 aa5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 CMSS1Q9BQ75 279 aaKnown RBP5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 DPH7Q9BTV6 452 aa5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC52A3Q9NQ40 469 aa5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 RBM22Q9NW64 420 aaKnown RBP eCLIP5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 ADAM28Q9UKQ2 775 aa5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 RNF6Q9Y252 685 aa5.56□□□□□ -1.52
SOX2-OT-218ENST00000498731 MGAMO43451 1857 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 NINQ8N4C6 2090 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 AQP12BA6NM10 295 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TARM1B6A8C7 271 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 G3V2T6 193 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FFAR3O14843 346 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC30A4O14863 429 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GPR42O15529 346 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 WBP4O75554 376 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TOXO94900 526 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MT-CYBP00156 380 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 APOA4P06727 396 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TSHRP16473 764 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 RPS19P39019 145 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MXD1Q05195 221 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ALKBH1Q13686 389 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 INPP5AQ14642 412 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GPR19Q15760 415 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 DPYSL2Q16555 572 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 DUSP6Q16828 381 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LGALSLQ3ZCW2 172 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LINC01559Q495D7 138 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 C9orf152Q5JTZ5 239 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM74A1Q5RGS3 127 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CCNJQ5T5M9 372 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MANEALQ5VSG8 457 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM45BPQ6NSW5 357 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CDPF1Q6NVV7 123 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FUT10Q6P4F1 479 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 BLOC1S3Q6QNY0 202 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TAS1R1Q7RTX1 841 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MAMDC2Q7Z304 686 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GALNT10Q86SR1 603 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TMEM173Q86WV6 379 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ADGRG3Q86Y34 549 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LIX1LQ8IVB5 337 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 AQP12AQ8IXF9 295 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF567Q8N184 647 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TMEM132CQ8N3T6 1108 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MS4A15Q8N5U1 240 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM45AQ8TCE6 357 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LRRC58Q96CX6 371 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TMEM169Q96HH4 297 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 MLPHQ9BV36 600 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FSD1LQ9BXM9 530 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 RACGAP1Q9H0H5 632 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TMEM168Q9H0V1 697 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 DUSP21Q9H596 190 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CD93Q9NPY3 652 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLCO1C1Q9NYB5 712 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CTSFQ9UBX1 484 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SPATA2Q9UM82 520 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 YARS2Q9Y2Z4 477 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 IRAK3Q9Y616 596 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 A0A0G2JMZ2 1700 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 HAX1O00165 279 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 KIAA0513O60268 411 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TBC1D4O60343 1298 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PRKRAO75569 313 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 F9P00740 461 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PTHP01270 115 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 VIPP01282 170 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LPLP06858 475 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PIRTP0C851 137 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZFP36L2P47974 494 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CDH17Q12864 832 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FCN2Q15485 313 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 TAZQ16635 292 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZNF674Q2M3X9 581 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 CERCAMQ5T4B2 595 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 LIPMQ5VYY2 423 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC30A6Q6NXT4 461 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 DBX2Q6ZNG2 339 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 C16orf59Q7L2K0 433 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FAM124AQ86V42 546 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GPALPP1Q8IXQ4 340 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GJD3Q8N144 294 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZSCAN1Q8NBB4 408 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR4D10Q8NGI6 311 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 OR8D4Q8NGM9 314 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 PHF21BQ96EK2 531 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ZBED6CLQ96FA7 236 aaPredicted RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SUSD3Q96L08 255 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SLC30A2Q9BRI3 323 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GTPBP2Q9BX10 602 aaKnown RBP5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 GPR63Q9BZJ6 419 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 SRRQ9GZT4 340 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 ABCB9Q9NP78 766 aa5.55□□□□□ -1.52
SOX2-OT-218ENST00000498731 NT5MQ9NPB1 228 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms