RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 LGI4Q8N135 537 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 KIF2BQ8N4N8 673 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 HORMAD2Q8N7B1 307 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 MDS2Q8NDY4 140 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 OR2L5Q8NG80 312 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ADAMTS18Q8TE60 1221 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 NXNL1Q96CM4 212 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 MRRFQ96E11 262 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 QRFPRQ96P65 431 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 SIGLEC12Q96PQ1 595 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 SERINC2Q96SA4 455 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 CDCP1Q9H5V8 836 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 PRM3Q9NNZ6 103 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 IGSF5Q9NSI5 407 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ZDHHC18Q9NUE0 388 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 OPTCQ9UBM4 332 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 MTRF1LQ9UGC7 380 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF490Q9ULM2 529 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 MRPS33Q9Y291 106 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ACOT9Q9Y305 439 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 ASB1Q9Y576 335 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 PCDHGB6Q9Y5F9 930 aa7.94□□□□□ -1.14
HMGXB4-207ENST00000498212 HECTD1Q9ULT8 2610 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 A0A087X1B8 175 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 SYCE1LA8MT33 242 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 K7EPI3 171 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CLDN4O14493 209 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CDK2AP1O14519 115 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 FCHO1O14526 889 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 LRRTM2O43300 516 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CLDN1O95832 211 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 TBX6O95947 436 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 C2P06681 752 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 STSP08842 583 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CD46P15529 392 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 EPORP19235 508 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 MST1P26927 711 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CERS1P27544 350 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 TPP2P29144 1249 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 EEF1DP29692 281 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CASP2P42575 452 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 MSH2P43246 934 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CLCN2P51788 898 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 MTTPP55157 894 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 HSD17B7P56937 341 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 IRF9Q00978 393 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 PMP22Q01453 160 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 TGM3Q08188 693 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC13A2Q13183 592 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 BMPR2Q13873 1038 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 E2F2Q14209 437 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 TBCCQ15814 346 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 UAP1Q16222 522 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 FAM83EQ2M2I3 478 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 SPINK14Q6IE38 97 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 ABHD17CQ6PCB6 329 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 GFRALQ6UXV0 394 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CEP128Q6ZU80 1094 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 MAMDC2Q7Z304 686 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 RPS19BP1Q86WX3 136 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF595Q8IYB9 648 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 CENPLQ8N0S6 344 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 FAM47BQ8NA70 645 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 TMEM178AQ8NBL3 297 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 FAM98AQ8NCA5 519 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 TMEM52Q8NDY8 209 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 SRFBP1Q8NEF9 429 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 NFAM1Q8NET5 270 aaPredicted RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 RHEBL1Q8TAI7 183 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 UBTD2Q8WUN7 234 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 KCTD4Q8WVF5 259 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF592Q92610 1267 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 UBE2E3Q969T4 207 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 SCMH1Q96GD3 660 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 F2RL3Q96RI0 385 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 HES7Q9BYE0 225 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 KLHL1Q9NR64 748 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 PRTFDC1Q9NRG1 225 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 SNX15Q9NRS6 342 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 PNO1Q9NRX1 252 aaKnown RBP7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 LRFN1Q9P244 771 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 DAPP1Q9UN19 280 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 GTF3C1Q12789 2109 aa7.93□□□□□ -1.14
HMGXB4-207ENST00000498212 PRRC2CQ9Y520 2896 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 A0A096LPK6 155 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TRBV11-1A0A0K0K1C0 115 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 A0A1B0GUH1 482 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 CCDC189A1A4V9 331 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 HMX2A2RU54 273 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 SYNDIG1LA6NDD5 238 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TGFBR3LH3BV60 316 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 CYR61O00622 381 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 NEURL1O76050 574 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MYO1DO94832 1006 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 UNC5CO95185 931 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MLYCDO95822 493 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 SP1P08047 785 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 PCNAP12004 261 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MTHFD2P13995 350 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 GFAPP14136 432 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms