RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 KRTCAP2Q8N6L1 136 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 Q8N9G6 341 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 PCYOX1LQ8NBM8 494 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 CLHC1Q8NHS4 586 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 FBXO27Q8NI29 283 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 C16orf78Q8WTQ4 265 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ROPN1LQ96C74 230 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 MTERF3Q96E29 417 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 ZNF764Q96H86 408 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 SLC45A3Q96JT2 553 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 EGLN2Q96KS0 407 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 FCRL4Q96PJ5 515 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 KLHL25Q9H0H3 589 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 KLHL31Q9H511 634 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 PRDM7Q9NQW5 492 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
VPS26A-209ENST00000497564 LEF1Q9UJU2 399 aaPredicted RBP13.48□□□□□ -0.25
VPS26A-209ENST00000497564 NUP210LQ5VU65 1888 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 LOC105369274A0A096LPK9 316 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 A0A0A6YYD5 115 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 IGHV5-51A0A0C4DH38 117 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 LOC102723532A0A0G2JNH3 316 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 C4orf51C9J302 202 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 MRASO14807 208 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 AIM2O14862 343 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 SCAMP2O15127 329 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 GYG2O15488 501 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ERI3O43414 337 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 KIF1CO43896 1103 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 TBX19O60806 448 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 MT-CO3P00414 261 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 NPPAP01160 153 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 KRT16P08779 473 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 MSL3P1P0C860 447 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ITGAXP20702 1163 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 HPCAL1P37235 193 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 SSR2P43308 183 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 NUDT2P50583 147 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 SRSF11Q05519 484 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 PDE7AQ13946 482 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 UGT8Q16880 541 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 KIF26BQ2KJY2 2108 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 MMEL1Q495T6 779 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 VPS26BQ4G0F5 336 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 CCNYL2Q5T2Q4 361 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 CDCP2Q5VXM1 449 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 FAM71E1Q6IPT2 247 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 TMEM71Q6P5X7 295 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ZNF793Q6ZN11 406 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 RETREG3Q86VR2 466 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 DSELQ8IZU8 1212 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 OR4N4Q8N0Y3 316 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 OR8J2Q8NGG1 315 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 UTP15Q8TED0 518 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 TEFMQ96QE5 360 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 CCDC3Q9BQI4 270 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 SORBS1Q9BX66 1292 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 NLNQ9BYT8 704 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ROGDIQ9GZN7 287 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 PDE7BQ9NP56 450 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ATP6V1HQ9UI12 483 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 CLCA2Q9UQC9 943 aa13.47□□□□□ -0.25
VPS26A-209ENST00000497564 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
VPS26A-209ENST00000497564 ARHGAP10A1A4S6 786 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 C9JVG2 144 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 RTCAO00442 366 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 GSC2O15499 205 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MAP3K7O43318 606 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 CPNE6O95741 557 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 PGRP06401 933 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 GP1BAP07359 652 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 ANKRD34CP0C6C1 535 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 CDK4P11802 303 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 HIST1H1TP22492 207 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 ATP5A1P25705 553 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 PPM1FP49593 454 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 HNRNPFP52597 415 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MAPK12P53778 367 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 PLA2G16P53816 162 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 CORO7P57737 925 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MXRA7P84157 204 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 E2F1Q01094 437 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 ART3Q13508 389 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 FAM174BQ3ZCQ3 159 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 AMZ1Q400G9 498 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 TIGD2Q4W5G0 525 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 SPANXN4Q5MJ08 99 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 MRM1Q6IN84 353 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 TMEM214Q6NUQ4 689 aaKnown RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 C8orf82Q6P1X6 216 aaPredicted RBP13.46□□□□□ -0.25
VPS26A-209ENST00000497564 C16orf89Q6UX73 402 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 ABHD13Q7L211 337 aa13.46□□□□□ -0.25
VPS26A-209ENST00000497564 R3HCC1LQ7Z5L2 792 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms