RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 WASH3PC4AMC7 463 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SPECC1L-ADORA2AF8WAN1 911 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SDHDO14521 159 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 CHUKO15111 745 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 LDLRP01130 860 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 CHRM5P08912 532 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 PABPC4LP0CB38 370 aaKnown RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 UBTFL6P0CB48 400 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF44P15621 663 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 GOT1P17174 413 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 FCARP24071 287 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TRIM23P36406 574 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 NKX2-1P43699 371 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 RAP1GAPP47736 663 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 GLIPR1P48060 266 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 ENTPD1P49961 510 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 KCNK10P57789 538 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 ZXDBP98169 803 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 BST1Q10588 318 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 HNRNPDQ14103 355 aaKnown RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 KEAP1Q14145 624 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 WDR43Q15061 677 aaKnown RBP eCLIP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 PTPAQ15257 358 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SYCP1Q15431 976 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TATDN3Q17R31 274 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 PDLIM3Q53GG5 364 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 EPHA10Q5JZY3 1008 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 ATF7IP2Q5U623 682 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 CARD17Q5XLA6 110 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 CEP85Q6P2H3 762 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 KLC3Q6P597 504 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 KCNV1Q6PIU1 500 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 Q75L30 129 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 OR4K1Q8NGD4 311 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 OR9K2Q8NGE7 335 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TRMT10AQ8TBZ6 339 aaKnown RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 PPP4R1Q8TF05 950 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 GIPC3Q8TF64 312 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SLC35F5Q8WV83 523 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SLC44A1Q8WWI5 657 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TRIB2Q92519 343 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 RND1Q92730 232 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 DPF1Q92782 380 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 DAZLQ92904 295 aaKnown RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 REPS1Q96D71 796 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 RAB39BQ96DA2 213 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 IFT74Q96LB3 600 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 VPS35Q96QK1 796 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 NPAS2Q99743 824 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 GAL3ST1Q99999 423 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 PAIP2Q9BPZ3 127 aaKnown RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TMEM43Q9BTV4 400 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 LRRC2Q9BYS8 371 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SUDS3Q9H7L9 328 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 C10orf88Q9H8K7 445 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TMEM51Q9NW97 253 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 MIOSQ9NXC5 875 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SERGEFQ9UGK8 458 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 OR10H1Q9Y4A9 318 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 SPIN1Q9Y657 262 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-224ENST00000497488 MSH6P52701 1360 aa5.65□□□□□ -1.51
BRCA1-224ENST00000497488 DHX57Q6P158 1386 aaKnown RBP5.65□□□□□ -1.51
BRCA1-224ENST00000497488 NALCNQ8IZF0 1738 aa5.65□□□□□ -1.51
BRCA1-224ENST00000497488 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-224ENST00000497488 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.51
BRCA1-224ENST00000497488 ROBO1Q9Y6N7 1651 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 KIR2DS5A0A0G2JLQ3 304 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 LOC100653049A0A140TA62 436 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ACOD1A6NK06 481 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 C17orf105B2RV13 164 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 KIR2DS3K7RE56 304 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 CHEK1O14757 476 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 KLF11O14901 512 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 HSPA12AO43301 675 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 GPR137BO60478 399 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ZIC3O60481 467 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 FCMRO60667 390 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 KRT34O76011 436 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 TM7SF2O76062 418 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 AXLP30530 894 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 RDXP35241 583 aaKnown RBP5.64□□□□□ -1.51
BRCA1-224ENST00000497488 SYKP43405 635 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 FNTAP49354 379 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 RPP38P78345 283 aaKnown RBP5.64□□□□□ -1.51
BRCA1-224ENST00000497488 MYBPHQ13203 477 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 CDH18Q13634 790 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 IL18Q14116 193 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ZRSR1Q15695 479 aaKnown RBP5.64□□□□□ -1.51
BRCA1-224ENST00000497488 MIDNQ504T8 468 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF311Q5JNZ3 666 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 EARS2Q5JPH6 523 aaKnown RBP5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ELFN2Q5R3F8 820 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 LIPKQ5VXJ0 399 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 FUT10Q6P4F1 479 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 BLOC1S2Q6QNY1 142 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 SYT10Q6XYQ8 523 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 IL17RELQ6ZVW7 336 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 LHFPL4Q7Z7J7 247 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 NPEPL1Q8NDH3 523 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms