RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PDK4Q16654 411 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 XKR6Q5GH73 641 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 UBAP2Q5T6F2 1119 aaKnown RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 RPS19BP1Q86WX3 136 aaKnown RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF227Q86WZ6 799 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 APCDD1LQ8NCL9 501 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 OR2L5Q8NG80 312 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 PTCD3Q96EY7 689 aaKnown RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 FAR2Q96K12 515 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 FRMD6Q96NE9 622 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 ATOH8Q96SQ7 321 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 NPLQ9BXD5 320 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 CAPS2Q9BXY5 557 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 REXO4Q9GZR2 422 aaKnown RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 IGSF5Q9NSI5 407 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 NUDT4Q9NZJ9 180 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 CD274Q9NZQ7 290 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 SEC14L3Q9UDX4 400 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 ZNF223Q9UK11 482 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 FBN2P35556 2912 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 NCOA6Q14686 2063 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-209ENST00000496445 MYO9AB2RTY4 2548 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 APCP25054 2843 aa13.35□□□□□ -0.27
VTI1A-209ENST00000496445 CCNT2O60583 730 aaKnown RBP13.34□□□□□ -0.27
VTI1A-209ENST00000496445 TFEBP19484 476 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 STX2P32856 288 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 MLF1P58340 268 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 OC90Q02509 493 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-209ENST00000496445 NAB1Q13506 487 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 ABHD17CQ6PCB6 329 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 GALNTL5Q7Z4T8 443 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 SIAH3Q8IW03 269 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 ARMC10Q8N2F6 343 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 UBTD2Q8WUN7 234 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 EFCAB11Q9BUY7 163 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 CD244Q9BZW8 370 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 TSPAN10Q9H1Z9 355 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-209ENST00000496445 TRIM45Q9H8W5 580 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-209ENST00000496445 PRTFDC1Q9NRG1 225 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 LRFN1Q9P244 771 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
VTI1A-209ENST00000496445 HMX2A2RU54 273 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 ANKDD1BA6NHY2 528 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 UBXN8O00124 270 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 CYR61O00622 381 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 B3GALT2O43825 422 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 NME2P1O60361 137 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 KERAO60938 352 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 SLC25A12O75746 678 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 MYO1DO94832 1006 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 S100BP04271 92 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-209ENST00000496445 SP1P08047 785 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 MYBL2P10244 700 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 CD46P15529 392 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 NME2P22392 152 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 EEF1DP29692 281 aaKnown RBP13.33□□□□□ -0.28
VTI1A-209ENST00000496445 TRHRP34981 398 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-209ENST00000496445 LIM2P55344 173 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 HSD17B7P56937 341 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 IRF9Q00978 393 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 SLC7A5Q01650 507 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 CHIT1Q13231 466 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 BMPR2Q13873 1038 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 TERF2Q15554 542 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 TBCCQ15814 346 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF793Q6ZN11 406 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 RAPH1Q70E73 1250 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 UBE3DQ7Z6J8 389 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 CLNKQ7Z7G1 428 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 CENPLQ8N0S6 344 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-209ENST00000496445 TMEM178AQ8NBL3 297 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 ARMC2Q8NEN0 867 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 B3GNT7Q8NFL0 401 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 STAG3L4Q8TBR4 150 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 CCDC120Q96HB5 630 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 GPR137Q96N19 417 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 F2RL3Q96RI0 385 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 MS4A8Q9BY19 250 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 PRDM7Q9NQW5 492 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 DAPP1Q9UN19 280 aa13.33□□□□□ -0.28
VTI1A-209ENST00000496445 PPIEQ9UNP9 301 aaKnown RBP13.33□□□□□ -0.28
VTI1A-209ENST00000496445 A0A088AWK7 358 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 TRGV8A0A0C4DH27 118 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 TRBV11-1A0A0K0K1C0 115 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 SUPT3HB4E1H0 165 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 CDK2AP1O14519 115 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 PRKNO60260 465 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 SUPT3HO75486 399 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 LTA4HP09960 611 aaKnown RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 MTHFD2P13995 350 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 ZNF10P21506 573 aaPredicted RBP13.32□□□□□ -0.28
VTI1A-209ENST00000496445 CRABP2P29373 138 aa13.32□□□□□ -0.28
VTI1A-209ENST00000496445 CASP2P42575 452 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms