RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 PNO1Q9NRX1 252 aaKnown RBP11.93□□□□□ -0.5
PTPRF-214ENST00000496043 MRPS33Q9Y291 106 aaKnown RBP11.93□□□□□ -0.5
PTPRF-214ENST00000496043 ACOT9Q9Y305 439 aa11.93□□□□□ -0.5
PTPRF-214ENST00000496043 MAST4O15021 2626 aa11.93□□□□□ -0.5
PTPRF-214ENST00000496043 TRGV8A0A0C4DH27 118 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SYNDIG1LA6NDD5 238 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 FCHO1O14526 889 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 PRAMEF4O60810 478 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 ZG16O60844 167 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 LTA4HP09960 611 aaKnown RBP11.92□□□□□ -0.5
PTPRF-214ENST00000496043 TPP2P29144 1249 aaPredicted RBP11.92□□□□□ -0.5
PTPRF-214ENST00000496043 CYB561P49447 251 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 CLCN2P51788 898 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 MTTPP55157 894 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 PMP22Q01453 160 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SLC7A5Q01650 507 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 ALDH6A1Q02252 535 aaKnown RBP11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SRSF11Q05519 484 aaKnown RBP11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SLC13A2Q13183 592 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 CHIT1Q13231 466 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SLMAPQ14BN4 828 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 MAPKAPK3Q16644 382 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 PRAMEF9Q5VWM5 478 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 ABHD17CQ6PCB6 329 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 VN1R5Q7Z5H4 357 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 CCDC91Q7Z6B0 441 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 CMC1Q7Z7K0 106 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 ZNF595Q8IYB9 648 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 B3GNT7Q8NFL0 401 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 EXT2Q93063 718 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 UBE2E3Q969T4 207 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 F2RL3Q96RI0 385 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 HES7Q9BYE0 225 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 COPS7BQ9H9Q2 264 aaPredicted RBP11.92□□□□□ -0.5
PTPRF-214ENST00000496043 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SUCOQ9UBS9 1254 aaKnown RBP11.92□□□□□ -0.5
PTPRF-214ENST00000496043 SVILO95425 2214 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 ZGRF1Q86YA3 2104 aa11.92□□□□□ -0.5
PTPRF-214ENST00000496043 ASPDHA6ND91 283 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 SUPT3HB4E1H0 165 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 CTNSO60931 367 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 SUPT3HO75486 399 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 NEURL1O76050 574 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 MYO1DO94832 1006 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 TBX6O95947 436 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-214ENST00000496043 SLC35E2BP0CK96 405 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 TRHRP34981 398 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-214ENST00000496043 DCTP40126 519 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 MSH2P43246 934 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 HLCSP50747 726 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 CASP6P55212 293 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 LIM2P55344 173 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 DLG1Q12959 904 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 EFTUD2Q15029 972 aaKnown RBP eCLIP11.91□□□□□ -0.53e-7■■■□□ 15.7
PTPRF-214ENST00000496043 TERF2Q15554 542 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 FAM83EQ2M2I3 478 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 ZNF468Q5VIY5 522 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-214ENST00000496043 ZNF787Q6DD87 383 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 MTFR2Q6P444 385 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 CHSY3Q70JA7 882 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 LRRC70Q7Z2Q7 622 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 GALNTL5Q7Z4T8 443 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-214ENST00000496043 SCUBE1Q8IWY4 988 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 SLC34A3Q8N130 599 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 TMEM132CQ8N3T6 1108 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 THAP3Q8WTV1 239 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-214ENST00000496043 TMEM125Q96AQ2 219 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 NXNL1Q96CM4 212 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 ATOH8Q96SQ7 321 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 CCDC77Q9BR77 488 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 LRRC1Q9BTT6 524 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 TBCDQ9BTW9 1192 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 TRIM45Q9H8W5 580 aaPredicted RBP11.91□□□□□ -0.5
PTPRF-214ENST00000496043 PRDM7Q9NQW5 492 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 IGSF5Q9NSI5 407 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 OPTCQ9UBM4 332 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 FBXW2Q9UKT8 454 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 DAPP1Q9UN19 280 aa11.91□□□□□ -0.5
PTPRF-214ENST00000496043 A0A087X1B8 175 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 TRBV11-1A0A0K0K1C0 115 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 CCDC189A1A4V9 331 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 SYCE1LA8MT33 242 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 K7EPI3 171 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 UBXN8O00124 270 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 CCL21O00585 134 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 CYR61O00622 381 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 KERAO60938 352 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 SLC25A12O75746 678 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 WISP2O76076 250 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 ZFAND5O76080 213 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 URI1O94763 535 aaPredicted RBP11.9□□□□□ -0.5
PTPRF-214ENST00000496043 IFNA16P05015 189 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 EPB42P16452 691 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 EPORP19235 508 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 CD22P20273 847 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 PHBP35232 272 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 GMPRP36959 345 aa11.9□□□□□ -0.5
PTPRF-214ENST00000496043 CA7P43166 264 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms