RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 C4orf17Q53FE4 359 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 FBXO48Q5FWF7 155 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 ZNF766Q5HY98 468 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 MROH9Q5TGP6 573 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 TUBA3EQ6PEY2 450 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 RPS19BP1Q86WX3 136 aaKnown RBP22.7■■□□□ 1.22
HLA-C-209ENST00000495835 SCUBE1Q8IWY4 988 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 LAS2Q8IYD9 372 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 AMER2Q8N7J2 671 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 NFAM1Q8NET5 270 aaPredicted RBP22.7■■□□□ 1.22
HLA-C-209ENST00000495835 NXNL1Q96CM4 212 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 NPAS2Q99743 824 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 NECTIN3Q9NQS3 549 aa22.7■■□□□ 1.22
HLA-C-209ENST00000495835 SUPT3HB4E1H0 165 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 FAM227AF5H4B4 570 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-209ENST00000495835 SUPT3HO75486 399 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 EPB42P16452 691 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 CD22P20273 847 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 EFTUD2Q15029 972 aaKnown RBP eCLIP22.69■■□□□ 1.223e-6■■■■■ 41.9
HLA-C-209ENST00000495835 TMEM35AQ53FP2 167 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 METTL2BQ6P1Q9 378 aaKnown RBP22.69■■□□□ 1.22
HLA-C-209ENST00000495835 CENPLQ8N0S6 344 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-209ENST00000495835 CYP4X1Q8N118 509 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 MDS2Q8NDY4 140 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 KCNC2Q96PR1 638 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 TBCDQ9BTW9 1192 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 COPS7BQ9H9Q2 264 aaPredicted RBP22.69■■□□□ 1.22
HLA-C-209ENST00000495835 SNX15Q9NRS6 342 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 NINJ2Q9NZG7 142 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 DAPP1Q9UN19 280 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 PPIEQ9UNP9 301 aaKnown RBP22.69■■□□□ 1.22
HLA-C-209ENST00000495835 NAV2Q8IVL1 2488 aa22.69■■□□□ 1.22
HLA-C-209ENST00000495835 HMX2A2RU54 273 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 UBXN8O00124 270 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 KLHL2O95198 593 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 STSP08842 583 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 MTHFD2P13995 350 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 CD46P15529 392 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 CD96P40200 585 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 PLA2G16P53816 162 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 PER3P56645 1201 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 NAA30Q147X3 362 aaPredicted RBP22.68■■□□□ 1.22
HLA-C-209ENST00000495835 FCRLBQ6BAA4 426 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 MED27Q6P2C8 311 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 KLC3Q6P597 504 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 CHSY3Q70JA7 882 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 TMEM178AQ8NBL3 297 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 EXT2Q93063 718 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 SCMH1Q96GD3 660 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 CDCP1Q9H5V8 836 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 TRIM45Q9H8W5 580 aaPredicted RBP22.68■■□□□ 1.22
HLA-C-209ENST00000495835 PRDM7Q9NQW5 492 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 PRTFDC1Q9NRG1 225 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 DMGDHQ9UI17 866 aaKnown RBP22.68■■□□□ 1.22
HLA-C-209ENST00000495835 TSC22D4Q9Y3Q8 395 aa22.68■■□□□ 1.22
HLA-C-209ENST00000495835 A0A1B0GUH1 482 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 GABRR3A8MPY1 467 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 CYSRT1A8MQ03 144 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 KLK8O60259 260 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 CTAGE8P0CG41 777 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 TYK2P29597 1187 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 SERPINB8P50452 374 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 ARFIP1P53367 373 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.67■■□□□ 1.22
HLA-C-209ENST00000495835 CTAGE4Q8IX94 777 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 B3GNT7Q8NFL0 401 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 ZNF473Q8WTR7 871 aaKnown RBP22.67■■□□□ 1.22
HLA-C-209ENST00000495835 KCTD4Q8WVF5 259 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 MS4A8Q9BY19 250 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 LYRM4Q9HD34 91 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 OSGIN2Q9Y236 505 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 ASB1Q9Y576 335 aa22.67■■□□□ 1.22
HLA-C-209ENST00000495835 TNPO3Q9Y5L0 923 aaKnown RBP22.67■■□□□ 1.22
HLA-C-209ENST00000495835 A0A096LPK6 155 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 CYR61O00622 381 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 CTNSO60931 367 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 MLYCDO95822 493 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 TRHRP34981 398 aaPredicted RBP22.66■■□□□ 1.22
HLA-C-209ENST00000495835 GMPRP36959 345 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 MSH2P43246 934 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 CLCN2P51788 898 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 ALDH18A1P54886 795 aaKnown RBP22.66■■□□□ 1.22
HLA-C-209ENST00000495835 LIM2P55344 173 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 SETDB1Q15047 1291 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 OR1C1Q15619 314 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 LIPJQ5W064 366 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 OR7G3Q8NG95 312 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 ZNF592Q92610 1267 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 CMTM7Q96FZ5 175 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 SIGLEC12Q96PQ1 595 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 F2RL3Q96RI0 385 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 FMO2Q99518 471 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 DEFB126Q9BYW3 111 aa22.66■■□□□ 1.22
HLA-C-209ENST00000495835 A0A0G2JN53 185 aa22.65■■□□□ 1.22
HLA-C-209ENST00000495835 LRRTM2O43300 516 aa22.65■■□□□ 1.22
HLA-C-209ENST00000495835 UGDHO60701 494 aa22.65■■□□□ 1.22
HLA-C-209ENST00000495835 SCELO95171 688 aa22.65■■□□□ 1.22
HLA-C-209ENST00000495835 ALDOAP04075 364 aaKnown RBP22.65■■□□□ 1.22
HLA-C-209ENST00000495835 RNF224P0DH78 156 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms