RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MAGEB17A8MXT2 336 aa15□□□□□ -0.01
LIME1-209ENST00000494776 CLDN4O14493 209 aa15□□□□□ -0.01
LIME1-209ENST00000494776 SEC24DO94855 1032 aaPredicted RBP15□□□□□ -0.01
LIME1-209ENST00000494776 MYL2P10916 166 aa15□□□□□ -0.01
LIME1-209ENST00000494776 PTX3P26022 381 aaPredicted RBP15□□□□□ -0.01
LIME1-209ENST00000494776 CRHR1P34998 444 aa15□□□□□ -0.01
LIME1-209ENST00000494776 SSR2P43308 183 aa15□□□□□ -0.01
LIME1-209ENST00000494776 NEK2P51955 445 aa15□□□□□ -0.01
LIME1-209ENST00000494776 EFNA3P52797 238 aa15□□□□□ -0.01
LIME1-209ENST00000494776 RAB38P57729 211 aa15□□□□□ -0.01
LIME1-209ENST00000494776 OR4D2P58180 307 aa15□□□□□ -0.01
LIME1-209ENST00000494776 RPS13P62277 151 aaKnown RBP15□□□□□ -0.01
LIME1-209ENST00000494776 AP2B1P63010 937 aa15□□□□□ -0.01
LIME1-209ENST00000494776 RHAGQ02094 409 aa15□□□□□ -0.01
LIME1-209ENST00000494776 CLCQ05315 142 aa15□□□□□ -0.01
LIME1-209ENST00000494776 IFT88Q13099 833 aa15□□□□□ -0.01
LIME1-209ENST00000494776 PCOLCEQ15113 449 aa15□□□□□ -0.01
LIME1-209ENST00000494776 CCDC153Q494R4 210 aa15□□□□□ -0.01
LIME1-209ENST00000494776 COLEC12Q5KU26 742 aa15□□□□□ -0.01
LIME1-209ENST00000494776 ZNF678Q5SXM1 525 aa15□□□□□ -0.01
LIME1-209ENST00000494776 DEPDC1Q5TB30 811 aa15□□□□□ -0.01
LIME1-209ENST00000494776 ATG14Q6ZNE5 492 aa15□□□□□ -0.01
LIME1-209ENST00000494776 HPS6Q86YV9 775 aa15□□□□□ -0.01
LIME1-209ENST00000494776 C4orf33Q8N1A6 199 aa15□□□□□ -0.01
LIME1-209ENST00000494776 OR4F6Q8NGB9 312 aa15□□□□□ -0.01
LIME1-209ENST00000494776 ADAMTS18Q8TE60 1221 aa15□□□□□ -0.01
LIME1-209ENST00000494776 TRPC4APQ8TEL6 797 aa15□□□□□ -0.01
LIME1-209ENST00000494776 TM9SF4Q92544 642 aa15□□□□□ -0.01
LIME1-209ENST00000494776 RGMAQ96B86 450 aa15□□□□□ -0.01
LIME1-209ENST00000494776 CCDC126Q96EE4 140 aa15□□□□□ -0.01
LIME1-209ENST00000494776 QRFPRQ96P65 431 aa15□□□□□ -0.01
LIME1-209ENST00000494776 IQCGQ9H095 443 aaKnown RBP15□□□□□ -0.01
LIME1-209ENST00000494776 ZNF552Q9H707 407 aaPredicted RBP15□□□□□ -0.01
LIME1-209ENST00000494776 ZBTB26Q9HCK0 441 aa15□□□□□ -0.01
LIME1-209ENST00000494776 PRDM9Q9NQV7 894 aa15□□□□□ -0.01
LIME1-209ENST00000494776 PRDM7Q9NQW5 492 aa15□□□□□ -0.01
LIME1-209ENST00000494776 C5AR2Q9P296 337 aa15□□□□□ -0.01
LIME1-209ENST00000494776 PLAAQ9Y263 795 aa15□□□□□ -0.01
LIME1-209ENST00000494776 MRPS33Q9Y291 106 aaKnown RBP15□□□□□ -0.01
LIME1-209ENST00000494776 TSC22D4Q9Y3Q8 395 aa15□□□□□ -0.01
LIME1-209ENST00000494776 SPACA6W5XKT8 324 aa15□□□□□ -0.01
LIME1-209ENST00000494776 A0A1W2PQ72 361 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 RTCAO00442 366 aaKnown RBP14.99□□□□□ -0.01
LIME1-209ENST00000494776 SUV39H1O43463 412 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 PRR35P0CG20 571 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 IMPDH1P20839 514 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 PRKAA2P54646 552 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 LIM2P55344 173 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 BTG2P78543 158 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 Q0VFX4 171 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 TRAF3Q13114 568 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 BTBD16Q32M84 506 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 SFT2D3Q587I9 215 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 SGO1Q5FBB7 561 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 OR4C11Q6IEV9 310 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 QSOX2Q6ZRP7 698 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 ACOT4Q8N9L9 421 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 FAM47BQ8NA70 645 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 TSLPQ969D9 159 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 TMEM237Q96Q45 408 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 LPAR4Q99677 370 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 C1QTNF3Q9BXJ4 246 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 MFRPQ9BY79 579 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 ELOVL6Q9H5J4 265 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 RAB21Q9UL25 225 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 DAPP1Q9UN19 280 aa14.99□□□□□ -0.01
LIME1-209ENST00000494776 MED13Q9UHV7 2174 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 ZNF462Q96JM2 2506 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 NUP210LQ5VU65 1888 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 FOXE1O00358 373 aaPredicted RBP14.98□□□□□ -0.01
LIME1-209ENST00000494776 MLYCDO95822 493 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 SERPINA7P05543 415 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 PLA2G2AP14555 144 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 MAOAP21397 527 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 HIST1H1TP22492 207 aaPredicted RBP14.98□□□□□ -0.01
LIME1-209ENST00000494776 ATP5A1P25705 553 aaKnown RBP14.98□□□□□ -0.01
LIME1-209ENST00000494776 SLC13A2Q13183 592 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 GGTA1PQ4G0N0 100 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 UNC50Q53HI1 259 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 FRG2Q64ET8 278 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 PAPD4Q6PIY7 484 aaKnown RBP14.98□□□□□ -0.01
LIME1-209ENST00000494776 ZYG11AQ6WRX3 759 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 RIPOR1Q6ZS17 1223 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 SH2D5Q6ZV89 423 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 UBE3DQ7Z6J8 389 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 ZADH2Q8N4Q0 377 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 MREGQ8N565 214 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 CCNYL1Q8N7R7 359 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 WDR20Q8TBZ3 569 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 FRG2BQ96QU4 278 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 EPS8L2Q9H6S3 715 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 LYRM4Q9HD34 91 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 PRTFDC1Q9NRG1 225 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 PTGFRNQ9P2B2 879 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 EMCNQ9ULC0 261 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 SNX6Q9UNH7 406 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 STK38LQ9Y2H1 464 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 MMACHCQ9Y4U1 282 aa14.98□□□□□ -0.01
LIME1-209ENST00000494776 SPTA1P02549 2419 aa14.97□□□□□ -0.01
LIME1-209ENST00000494776 J3QKU1 62 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms