RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CLN6Q9NWW5 311 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 RUVBL1Q9Y265 456 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 SNX11Q9Y5W9 270 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 CCDC182A6NF36 153 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 SYN3O14994 580 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 CSF2P04141 144 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 IGFBP1P08833 259 aaPredicted RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 PPIBP23284 216 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 HNMTP50135 292 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 SNRPGP62308 76 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 ELOAQ14241 798 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 LEXMQ3ZCV2 418 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 GPR33Q49SQ1 333 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 ABI3BPQ7Z7G0 1075 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TRIM48Q8IWZ4 208 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 PHC2Q8IXK0 858 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 NANOGP1Q8N7R0 232 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 GOT1L1Q8NHS2 421 aaPredicted RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 CDC26Q8NHZ8 85 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 NFKBIDQ8NI38 313 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 WFDC5Q8TCV5 224 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 APOBEC4Q8WW27 367 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 LINC01599Q8WXQ3 324 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TRIM63Q969Q1 353 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 ARHGAP39Q9C0H5 1083 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TRIM39Q9HCM9 518 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 C1GALT1Q9NS00 363 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 C2orf78A6NCI8 922 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 CPNE3O75131 537 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 GPC1P35052 558 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 PCBP3P57721 371 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 HBA1P69905 142 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 DUSP4Q13115 394 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 GANABQ14697 944 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 CPTPQ5TA50 214 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TPGS1Q6ZTW0 290 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 DDX53Q86TM3 631 aaKnown RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 SLC44A2Q8IWA5 706 aaPredicted RBP14.7□□□□□ -0.06
SDF4-207ENST00000494748 SLC38A6Q8IZM9 456 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 FRMD6Q96NE9 622 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 PRRG3Q9BZD7 231 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TM6SF2Q9BZW4 377 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 KCND3Q9UK17 655 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 TMPRSS11EQ9UL52 423 aa14.7□□□□□ -0.06
SDF4-207ENST00000494748 A8MX80 341 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 SMAD6O43541 496 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 MPZL2O60487 215 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 ALAS2P22557 587 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 SPAM1P38567 509 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 NSG1P42857 185 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 GZMKP49863 264 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 DGKKQ5KSL6 1271 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 FAM46DQ8NEK8 389 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 IL4I1Q96RQ9 567 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 TMEM121BQ9BXQ6 578 aaPredicted RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 ATG10Q9H0Y0 220 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 CARD8Q9Y2G2 431 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 IGLV3-16A0A075B6K0 115 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 SEMA7AO75326 666 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 HLA-DQB1P01920 261 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 C8GP07360 202 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 FEN1P39748 380 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 SEMG2Q02383 582 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 GPR17Q13304 367 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 SCARB2Q14108 478 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 MPEG1Q2M385 716 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 TRIM60Q495X7 471 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 CRB2Q5IJ48 1285 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 RNLSQ5VYX0 342 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 FAM131AQ6UXB0 335 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 RFLNAQ6ZTI6 216 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 ANKS3Q6ZW76 656 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 CBARPQ8N350 705 aaPredicted RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 NECTIN4Q96NY8 510 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 TXNL4BQ9NX01 149 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 RHCGQ9UBD6 479 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 KLHL21Q9UJP4 597 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 A0A1W2PQL4 384 aaPredicted RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 OR6C70A6NIJ9 312 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 E7EQ34 232 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 RNASET2O00584 256 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 POLR1CO15160 346 aaPredicted RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 AKR7A2O43488 359 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 SSTR4P31391 388 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 CRATP43155 626 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 OR3A3P47888 321 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 ADGRF1Q5T601 910 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 LIPJQ5W064 366 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 TIGD3Q6B0B8 471 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 BCDIN3DQ7Z5W3 292 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 OR4A15Q8NGL6 344 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 SNAPC3Q92966 411 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 PARK7Q99497 189 aaKnown RBP14.69□□□□□ -0.06
SDF4-207ENST00000494748 SOSTQ9BQB4 213 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.69□□□□□ -0.065e-6■□□□□ 11
SDF4-207ENST00000494748 TMEM245Q9H330 911 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 DNAJC27Q9NZQ0 273 aa14.69□□□□□ -0.06
SDF4-207ENST00000494748 OR6C75A6NL08 312 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms