RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 MKKSQ9NPJ1 570 aaPredicted RBP10.5□□□□□ -0.73
APTX-230ENST00000494649 SNX6Q9UNH7 406 aa10.5□□□□□ -0.73
APTX-230ENST00000494649 LHX6Q9UPM6 363 aa10.5□□□□□ -0.73
APTX-230ENST00000494649 MAN2B2Q9Y2E5 1009 aa10.5□□□□□ -0.73
APTX-230ENST00000494649 A6NL46 340 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 TM9SF1O15321 606 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ITM2AO43736 263 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 B3GALT2O43825 422 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ZWINTO95229 277 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 MAOAP21397 527 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 GSTM2P28161 218 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 MTTPP55157 894 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 WDR4P57081 412 aaKnown RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 EEF1A2Q05639 463 aaKnown RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 UGT8Q16880 541 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 AP5B1Q2VPB7 878 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 HHATQ5VTY9 493 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 PPP1R32Q7Z5V6 425 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 CLNKQ7Z7G1 428 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 MRGPREQ86SM8 312 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 EFCAB3Q8N7B9 438 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ACOT4Q8N9L9 421 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 TMEM52Q8NDY8 209 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ADAMTS17Q8TE56 1095 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 MAPKAP1Q9BPZ7 522 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 TRIM55Q9BYV6 548 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 SLC26A1Q9H2B4 701 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ACTL7BQ9Y614 415 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 HS3ST3B1Q9Y662 390 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 SPENQ96T58 3664 aaKnown RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 ZFYVE26Q68DK2 2539 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 IGLV3-12A0A075B6K2 115 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 WASHC1A8K0Z3 465 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 PSMD12O00232 456 aaPredicted RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 ULK1O75385 1050 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 FHP07954 510 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 FAM87AP0C7U9 286 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 HIST1H1TP22492 207 aaPredicted RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 ATP5A1P25705 553 aaKnown RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 PTX3P26022 381 aaPredicted RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 EMP2P54851 167 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 LIM2P55344 173 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 PKNOX1P55347 436 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ID2Q02363 134 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 SLAMF1Q13291 335 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 SSPNQ14714 243 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 SH2D4BQ5SQS7 431 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 OR4C11Q6IEV9 310 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 UCN3Q969E3 161 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 RGMAQ96B86 450 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 TBC1D20Q96BZ9 403 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ATP6V1G3Q96LB4 118 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 PPP1R36Q96LQ0 422 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 QRFPRQ96P65 431 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 CENPKQ9BS16 269 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 ZNF717Q9BY31 904 aaPredicted RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 ACPTQ9BZG2 426 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 C20orf27Q9GZN8 174 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 WDR54Q9H977 334 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 SSU72Q9NP77 194 aaKnown RBP10.49□□□□□ -0.73
APTX-230ENST00000494649 P4HTMQ9NXG6 502 aa10.49□□□□□ -0.73
APTX-230ENST00000494649 GLOD5A6NK44 160 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 TMPRSS11DO60235 418 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 ONECUT2O95948 504 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 KRT6AP02538 564 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 KRT6BP04259 564 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 KLK1P06870 262 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 KRT6CP48668 564 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 MC1RQ01726 317 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 TGM3Q08188 693 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 RCN2Q14257 317 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 TBR1Q16650 682 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 SPDYAQ5MJ70 313 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 C18orf63Q68DL7 685 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 KIRREL2Q6UWL6 708 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 SREK1Q8WXA9 508 aaKnown RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 SEC16BQ96JE7 1060 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 CNDP1Q96KN2 507 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 SERINC2Q96SA4 455 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 ARHGAP9Q9BRR9 750 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 EBPLQ9BY08 206 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 NXT1Q9UKK6 140 aaKnown RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 POLHQ9Y253 713 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 PIEZO2Q9H5I5 2752 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 BSNQ9UPA5 3926 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 A0A088AWK7 358 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 A8MUA0 341 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 FOXE1O00358 373 aaPredicted RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 SOCS6O14544 535 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 LDB3O75112 727 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 SKAP2O75563 359 aaPredicted RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 RECKO95980 971 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 DHRS4L1P0CG22 281 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 RNH1P13489 461 aaKnown RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 ZNF10P21506 573 aaPredicted RBP10.48□□□□□ -0.73
APTX-230ENST00000494649 MMP11P24347 488 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 SERPINB1P30740 379 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 BSGP35613 385 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 CCL11P51671 97 aa10.48□□□□□ -0.73
APTX-230ENST00000494649 HNRNPH2P55795 449 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms