RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RHBDF1Q96CC6 855 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 PHF21BQ96EK2 531 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 FAR2Q96K12 515 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 TMEM237Q96Q45 408 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 DRC3Q9H069 523 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 SLC26A1Q9H2B4 701 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 WDR54Q9H977 334 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 UTP6Q9NYH9 597 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 OPTCQ9UBM4 332 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 PTBP2Q9UKA9 531 aaKnown RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 ADAMTS6Q9UKP5 1117 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 ANGPTL3Q9Y5C1 460 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 CACNA1CQ13936 2221 aa11.12□□□□□ -0.63
CSNK1E-212ENST00000494610 CPAMD8Q8IZJ3 1885 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SLCO1B7G3V0H7 640 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SNNO75324 88 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 STK16O75716 305 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SUPT7LO94864 414 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 GUCA1CO95843 209 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 WDPCPO95876 746 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 ONECUT2O95948 504 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 ALBP02768 609 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 EIF2S1P05198 315 aaKnown RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 ZGLP1P0C6A0 271 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 PRR35P0CG20 571 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 COX6A1P12074 109 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 COX6B1P14854 86 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 EEF1DP29692 281 aaKnown RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SOX11P35716 441 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 GGT5P36269 586 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 KIR3DL1P43629 444 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 BDKRB1P46663 353 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SLC1A6P48664 564 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 NAGLUP54802 743 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 BST1Q10588 318 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 LCP2Q13094 533 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SF1Q15637 639 aaKnown RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF630Q2M218 657 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 WASHC2DQ5SRD0 308 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 ATG9BQ674R7 924 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 CAPN13Q6MZZ7 669 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 RPUSD3Q6P087 351 aaKnown RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 WDR75Q8IWA0 830 aaKnown RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 DLG3Q92796 817 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 LMF1Q96S06 567 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 PCBD2Q9H0N5 130 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 TSPAN10Q9H1Z9 355 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 PFDN4Q9NQP4 134 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 TINAGQ9UJW2 476 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 C3orf18Q9UK00 162 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 IKZF3Q9UKT9 509 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 KLF2Q9Y5W3 355 aaPredicted RBP11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 SPG11Q96JI7 2443 aa11.11□□□□□ -0.63
CSNK1E-212ENST00000494610 NCOA6Q14686 2063 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 A0A0J9YVX5 310 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 HYKKA2RU49 373 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 K7EPI3 171 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 PRICKLE3O43900 615 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 CCNT2O60583 730 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 EDF1O60869 148 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 OTCP00480 354 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 HPP00738 406 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ITGAMP11215 1152 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ACPPP15309 386 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 EPB42P16452 691 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 RAB28P51157 221 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ARSFP54793 590 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 PKNOX1P55347 436 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 OCRLQ01968 901 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 NAA25Q14CX7 972 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 C3AR1Q16581 482 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 SYT16Q17RD7 645 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 BNC2Q6ZN30 1099 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ZCCHC23Q6ZST2 131 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 KBTBD2Q8IY47 623 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 KLHDC8AQ8IYD2 350 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 OR6Y1Q8NGX8 325 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF483Q8TF39 744 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF285Q96NJ3 590 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF382Q96SR6 550 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 MIPEPQ99797 713 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 HAUS8Q9BT25 410 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 CD244Q9BZW8 370 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 ZNF304Q9HCX3 659 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 CCDC177Q9NQR7 707 aaPredicted RBP11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 SEMA3GQ9NS98 782 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 DNAJC11Q9NVH1 559 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 GPRC5BQ9NZH0 403 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 SEC14L3Q9UDX4 400 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 PCTPQ9UKL6 214 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 RAP2CQ9Y3L5 183 aa11.1□□□□□ -0.63
CSNK1E-212ENST00000494610 NAV3Q8IVL0 2385 aa11.09□□□□□ -0.63
CSNK1E-212ENST00000494610 NSG1A0A0A6YYJ2 146 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms