RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 DUSP26Q9BV47 211 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 GGACTQ9BVM4 153 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 UGT2B28Q9BY64 529 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 GPR61Q9BZJ8 451 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 NXF2Q9GZY0 626 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 DUSP21Q9H596 190 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SPACA1Q9HBV2 294 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 OXSMQ9NWU1 459 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 GFOD1Q9NXC2 390 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 NKIRAS2Q9NYR9 191 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 WWOXQ9NZC7 414 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SLAMF8Q9P0V8 285 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PPP4R1LQ9P1A2 415 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 GRHPRQ9UBQ7 328 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SH3BGRL2Q9UJC5 107 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SARDHQ9UL12 918 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 STAP1Q9ULZ2 295 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 TRAPPC4Q9Y296 219 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 POLR3HQ9Y535 204 aaPredicted RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 A3GALT2U3KPV4 340 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SPATA31A1Q5TZJ5 1347 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PRR36Q9H6K5 1346 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ROBO2Q9HCK4 1378 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 AKAP11Q9UKA4 1901 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 A0A1W2PPE3 182 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 TCRBV5S2A0A599 114 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 MPTX1A8MV57 137 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 D6RAR5 112 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PRR23D1E9PI22 279 aaPredicted RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 M0R129 80 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 KCNK1O00180 336 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PSMD9O00233 223 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ANKRD28O15084 1053 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SPDEFO95238 335 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ATG7O95352 703 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PEX11BO96011 259 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 VIPP01282 170 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 JCHAINP01591 159 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 POLBP06746 335 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 FGF2P09038 288 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 HIST1H2AGP0C0S8 130 aaPredicted RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 ANKRD34CP0C6C1 535 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PRR23D2P0DMB1 279 aaPredicted RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 SLC2A1P11166 492 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ZNF35P13682 527 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ANXA8P13928 327 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 CSF2RAP15509 400 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 NME1P15531 152 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 HIST1H2ADP20671 130 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 HNF1AP20823 631 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ACO1P21399 889 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 RFX1P22670 979 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ACVR2AP27037 513 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 RORAP35398 523 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 OMPP47874 163 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 RBP2P50120 134 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 BCAMP50895 628 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 CAV3P56539 151 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 MTPNP58546 118 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 OGDHQ02218 1023 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PTP4A2Q12974 167 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 HNRNPA0Q13151 305 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 GINS1Q14691 196 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 NHLRC3Q5JS37 347 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SAPCD1Q5SSQ6 148 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 GCNT6Q5T4J0 391 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 SH3PXD2AQ5TCZ1 1133 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 STRIP1Q5VSL9 837 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ANXA8L1Q5VT79 327 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 LIPKQ5VXJ0 399 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 HIST2H2AA3Q6FI13 130 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 MSANTD2Q6P1R3 559 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 NOTUMQ6P988 496 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PAPD4Q6PIY7 484 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 FAM198BQ6UWH4 519 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 LCLAT1Q6UWP7 414 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 Q6ZPB1 254 aaPredicted RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 DET1Q7L5Y6 550 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 TMEM179BQ7Z7N9 219 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 ANKRD46Q86W74 232 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 GHDCQ8N2G8 530 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 MIER2Q8N344 545 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PCSK9Q8NBP7 692 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 MCPH1Q8NEM0 835 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PPHLN1Q8NEY8 458 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 TM9SF4Q92544 642 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 DNASE1L2Q92874 299 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 EXT2Q93063 718 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 TMEM203Q969S6 136 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 MRPL38Q96DV4 380 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 PHF21BQ96EK2 531 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 DYNLL2Q96FJ2 89 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 CPNE2Q96FN4 548 aaPredicted RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 MARS2Q96GW9 593 aaKnown RBP3.89□□□□□ -1.79
ATG3-207ENST00000494571 HIST1H2AHQ96KK5 128 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 C5orf34Q96MH7 638 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 PPM1MQ96MI6 270 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 RNF157Q96PX1 679 aa3.89□□□□□ -1.79
ATG3-207ENST00000494571 HBEGFQ99075 208 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms