RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ENO2P09104 434 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 NCF1P14598 390 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 CD1EP15812 388 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 ZNF10P21506 573 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 GABRB3P28472 473 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 TRHRP34981 398 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 PLA2G16P53816 162 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 NUP107P57740 925 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 CCZ1BP86790 482 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 CCZ1P86791 482 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 TIAL1Q01085 375 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR4-216ENST00000494503 STX4Q12846 297 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 SLBPQ14493 270 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR4-216ENST00000494503 CES4AQ5XG92 561 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 FAM45BPQ6NSW5 357 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 NXPE4Q6UWF7 544 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 STRA8Q7Z7C7 330 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 CTAGE6Q86UF2 777 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 SLC22A16Q86VW1 577 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 CHERPQ8IWX8 916 aaKnown RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR4-216ENST00000494503 CLYBLQ8N0X4 340 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 APCDD1LQ8NCL9 501 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 NFAM1Q8NET5 270 aaPredicted RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 OR4K1Q8NGD4 311 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 FAM45AQ8TCE6 357 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 NRGNQ92686 78 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 PBKQ96KB5 322 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 PWWP2AQ96N64 755 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 RUNDC3BQ96NL0 473 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 SMC6Q96SB8 1091 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 OR8D2Q9GZM6 311 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 SLC6A16Q9GZN6 736 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 TNFRSF10DQ9UBN6 386 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 CHMP2BQ9UQN3 213 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 YARS2Q9Y2Z4 477 aaKnown RBP8.97□□□□□ -0.97
UBR4-216ENST00000494503 VWA7Q9Y334 891 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 MMACHCQ9Y4U1 282 aa8.97□□□□□ -0.97
UBR4-216ENST00000494503 IGKV3D-11A0A0A0MRZ8 115 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 A0A0G2JMM0 328 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ATP6AP2A0A1C7CYW4 349 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 A0A1W2PPB8 328 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 A0A1W2PRS3 328 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ANKDD1BA6NHY2 528 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 FIGNL2A6NMB9 653 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 KIR3DP1A8MWS1 328 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 C4orf51C9J302 202 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 CDC7O00311 574 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 CDK2AP1O14519 115 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ATP6AP2O75787 350 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 OR6B1O95007 311 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 SERPINA6P08185 405 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 SOX3P41225 446 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 MAGEA3P43357 314 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 NR0B1P51843 470 aaKnown RBP8.96□□□□□ -0.98
UBR4-216ENST00000494503 RAB38P57729 211 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ZNF460Q14592 562 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ZNF750Q32MQ0 723 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 RNASEH2BQ5TBB1 312 aaKnown RBP8.96□□□□□ -0.98
UBR4-216ENST00000494503 FBXW10Q5XX13 1052 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 TRIM40Q6P9F5 258 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 HSDL2Q6YN16 418 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 SPNS3Q6ZMD2 512 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 GK5Q6ZS86 529 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 KIAA0408Q6ZU52 694 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 FAM47EQ6ZV65 393 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ACAD11Q709F0 780 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 WDR53Q7Z5U6 358 aaPredicted RBP8.96□□□□□ -0.98
UBR4-216ENST00000494503 KLHDC8AQ8IYD2 350 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 KRT78Q8N1N4 520 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 SNX31Q8N9S9 440 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ZFP62Q8NB50 900 aaPredicted RBP8.96□□□□□ -0.98
UBR4-216ENST00000494503 OR2M7Q8NG81 312 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 LILRB4Q8NHJ6 448 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 CREB3L4Q8TEY5 395 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 GAL3ST3Q96A11 431 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 NAT9Q9BTE0 207 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 SARGQ9BW04 601 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 TRIM45Q9H8W5 580 aaPredicted RBP8.96□□□□□ -0.98
UBR4-216ENST00000494503 ADAP2Q9NPF8 381 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 NPDC1Q9NQX5 325 aaPredicted RBP8.96□□□□□ -0.98
UBR4-216ENST00000494503 PNPLA3Q9NST1 481 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 ACAD8Q9UKU7 415 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 PPP2R2CQ9Y2T4 447 aa8.96□□□□□ -0.98
UBR4-216ENST00000494503 PINLYPA6NC86 204 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 PRKNO60260 465 aaPredicted RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 P04436 131 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 GNAZP19086 355 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 ACVR2AP27037 513 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 CERS1P27544 350 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 MSX1P28360 303 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 HNRNPH1P31943 449 aaKnown RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 ELK3P41970 407 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 GDF5P43026 501 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 MAGEA5P43359 124 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 HNRNPFP52597 415 aaKnown RBP8.95□□□□□ -0.98
UBR4-216ENST00000494503 SLC12A2P55011 1212 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 HSD17B7P56937 341 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 PPP2R2AP63151 447 aa8.95□□□□□ -0.98
UBR4-216ENST00000494503 ID2Q02363 134 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms