RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IL3P08700 152 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 FAM58BPP0C7Q3 252 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 ZNF28P17035 718 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 TSPAN7P41732 249 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 OR1D4P47884 311 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 HNRNPH2P55795 449 aaKnown RBP18.35■□□□□ 0.53
USP39-218ENST00000493829 TERF2Q15554 542 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 SYT16Q17RD7 645 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 SMU1Q2TAY7 513 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 CYB5D1Q6P9G0 228 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 PAOXQ6QHF9 649 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 KRTCAP2Q8N6L1 136 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 C16orf78Q8WTQ4 265 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 FAM122AQ96E09 287 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 METTL2AQ96IZ6 378 aaKnown RBP18.35■□□□□ 0.53
USP39-218ENST00000493829 MAPKAP1Q9BPZ7 522 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 ROGDIQ9GZN7 287 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 ZNF385DQ9H6B1 395 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 SAR1AQ9NR31 198 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 TEX10Q9NXF1 929 aaPredicted RBP18.35■□□□□ 0.53
USP39-218ENST00000493829 ASIC5Q9NY37 505 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 ADAM29Q9UKF5 820 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 B3GALT1Q9Y5Z6 326 aa18.35■□□□□ 0.53
USP39-218ENST00000493829 A0A1B0GX78 115 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 DSCR3O14972 297 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 PRPS2P11908 318 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 GCGRP47871 477 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 AVPR1BP47901 424 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ARSFP54793 590 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 UFM1P61960 85 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 RUNX2Q13950 521 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 SQLEQ14534 574 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 GSTA3Q16772 222 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 METTL21CQ5VZV1 264 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 TMPRSS12Q86WS5 348 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 MIER2Q8N344 545 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ZCCHC7Q8N3Z6 543 aaKnown RBP18.34■□□□□ 0.53
USP39-218ENST00000493829 FAM47BQ8NA70 645 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 SLC38A9Q8NBW4 561 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 WDR36Q8NI36 951 aaKnown RBP18.34■□□□□ 0.53
USP39-218ENST00000493829 ADAMTS14Q8WXS8 1223 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 TEX37Q96LM6 180 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ULBP3Q9BZM4 244 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 FBXO8Q9NRD0 319 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 SIRT5Q9NXA8 310 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 SRPK3Q9UPE1 567 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 TMEM184BQ9Y519 407 aaPredicted RBP18.34■□□□□ 0.53
USP39-218ENST00000493829 CCDC22O60826 627 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 DCTN3O75935 186 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 KIAA0754O94854 1291 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 SCELO95171 688 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 CD1EP15812 388 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 TSFMP43897 325 aaKnown RBP18.34■□□□□ 0.53
USP39-218ENST00000493829 ALDH9A1P49189 494 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 SHC2P98077 582 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 MC1RQ01726 317 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 FAM53BQ14153 422 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.34■□□□□ 0.53
USP39-218ENST00000493829 DCAF12Q5T6F0 453 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ANKRD26P1Q6NSI1 321 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 TMEM132CQ8N3T6 1108 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ERP27Q96DN0 273 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 CSF3RQ99062 836 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 YIPF2Q9BWQ6 316 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 BRINP2Q9C0B6 783 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ACTL8Q9H568 366 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.34■□□□□ 0.53
USP39-218ENST00000493829 ATG4BQ9Y4P1 393 aa18.34■□□□□ 0.53
USP39-218ENST00000493829 NSA2O95478 260 aaKnown RBP18.33■□□□□ 0.52
USP39-218ENST00000493829 ACPPP15309 386 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 ARFIP1P53367 373 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 EMP3P54852 163 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 LIM2P55344 173 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 EIF3IQ13347 325 aaKnown RBP18.33■□□□□ 0.52
USP39-218ENST00000493829 PDCD4Q53EL6 469 aaKnown RBP18.33■□□□□ 0.52
USP39-218ENST00000493829 ARHGAP40Q5TG30 622 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 CEACAM20Q6UY09 585 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 CA13Q8N1Q1 262 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 UCN3Q969E3 161 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 COL26A1Q96A83 441 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 LRRC37BQ96QE4 947 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 DPY30Q9C005 99 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 MYNNQ9NPC7 610 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 SDR39U1Q9NRG7 319 aaPredicted RBP18.33■□□□□ 0.52
USP39-218ENST00000493829 ENAMQ9NRM1 1142 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 PCDHB3Q9Y5E6 796 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 PTPRBP23467 1997 aa18.33■□□□□ 0.52
USP39-218ENST00000493829 TEX51A0A1B0GUA7 166 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 GLOD5A6NK44 160 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 PSMD12O00232 456 aaPredicted RBP18.32■□□□□ 0.52
USP39-218ENST00000493829 CPNE3O75131 537 aaKnown RBP18.32■□□□□ 0.52
USP39-218ENST00000493829 ITGAXP20702 1163 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 SDHBP21912 280 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 GPX3P22352 226 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 RAB15P59190 212 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 SKP1P63208 163 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 C2orf80Q0P641 193 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 AGKQ53H12 422 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 C18orf63Q68DL7 685 aa18.32■□□□□ 0.52
USP39-218ENST00000493829 RHBDD2Q6NTF9 364 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms