RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 PPP1R14CQ8TAE6 165 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 STT3BQ8TCJ2 826 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 AGAP11Q8TF27 550 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MIEF2Q96C03 454 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 TLCD1Q96CP7 247 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MTFMTQ96DP5 389 aaKnown RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 MS4A6EQ96DS6 147 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 CMTM7Q96FZ5 175 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 FRG2BQ96QU4 278 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 F2RL3Q96RI0 385 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 CENPKQ9BS16 269 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 GATA5Q9BWX5 397 aaPredicted RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 SLC29A3Q9BZD2 475 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 SLC26A1Q9H2B4 701 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 OR51B5Q9H339 312 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 WDR54Q9H977 334 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 VIPAS39Q9H9C1 493 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MKKSQ9NPJ1 570 aaPredicted RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 C14orf105Q9NVL8 296 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 NXT1Q9UKK6 140 aaKnown RBP10.96□□□□□ -0.65
CTSA-209ENST00000493522 TSC22D4Q9Y3Q8 395 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 MAP4K5Q9Y4K4 846 aa10.96□□□□□ -0.65
CTSA-209ENST00000493522 UTP20O75691 2785 aaKnown RBP10.96□□□□□ -0.66
CTSA-209ENST00000493522 SPTBN1Q01082 2364 aaKnown RBP10.96□□□□□ -0.66
CTSA-209ENST00000493522 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.66
CTSA-209ENST00000493522 DOCK10Q96BY6 2186 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 MED13Q9UHV7 2174 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 TMEM120BA0PK00 339 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 WDR91A4D1P6 747 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 MAGEB17A8MXT2 336 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 AGPSO00116 658 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 SAP18O00422 153 aaKnown RBP10.95□□□□□ -0.66
CTSA-209ENST00000493522 B3GALT2O43825 422 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ESRRBO95718 433 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 TBX6O95947 436 aaPredicted RBP10.95□□□□□ -0.66
CTSA-209ENST00000493522 KRT6AP02538 564 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 KRT6BP04259 564 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ENO1P06733 434 aaKnown RBP10.95□□□□□ -0.66
CTSA-209ENST00000493522 BPGMP07738 259 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 CERS1P27544 350 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ETV4P43268 484 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 SSR2P43308 183 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 XCR1P46094 333 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 KRT6CP48668 564 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 NEK2P51955 445 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 BTN3A2P78410 334 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ADPRMQ3LIE5 342 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 TMEM35AQ53FP2 167 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 VWA2Q5GFL6 755 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 TCHHL1Q5QJ38 904 aaPredicted RBP10.95□□□□□ -0.66
CTSA-209ENST00000493522 KHDRBS2Q5VWX1 349 aaKnown RBP10.95□□□□□ -0.66
CTSA-209ENST00000493522 ZCCHC23Q6ZST2 131 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 CHSY3Q70JA7 882 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 TMEM151BQ8IW70 566 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 OR51Q1Q8NH59 317 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 WDR20Q8TBZ3 569 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 SELENOMQ8WWX9 145 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 MIB2Q96AX9 1013 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ARL8AQ96BM9 186 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 PEX11GQ96HA9 241 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 KCNA7Q96RP8 456 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 SPSB2Q99619 263 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 PAIP2Q9BPZ3 127 aaKnown RBP10.95□□□□□ -0.66
CTSA-209ENST00000493522 CRB3Q9BUF7 120 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 SHCBP1LQ9BZQ2 653 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ACBD3Q9H3P7 528 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 MLXIPLQ9NP71 852 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 ZNF225Q9UK10 706 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 SNX6Q9UNH7 406 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 TP53TG5Q9Y2B4 290 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 KCNMB2Q9Y691 235 aa10.95□□□□□ -0.66
CTSA-209ENST00000493522 IGLV3-12A0A075B6K2 115 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 VSTM2BA6NLU5 285 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 PSMD12O00232 456 aaPredicted RBP10.94□□□□□ -0.66
CTSA-209ENST00000493522 RTCAO00442 366 aaKnown RBP10.94□□□□□ -0.66
CTSA-209ENST00000493522 MANBAO00462 879 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 UBFD1O14562 309 aaKnown RBP10.94□□□□□ -0.66
CTSA-209ENST00000493522 CHST10O43529 356 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 KLF7O75840 302 aaPredicted RBP10.94□□□□□ -0.66
CTSA-209ENST00000493522 ZGLP1P0C6A0 271 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 SMIM10L1P0DMW3 83 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 NEFHP12036 1026 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 CD97P48960 835 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 MTTPP55157 894 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 KLC1Q07866 573 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 UGT8Q16880 541 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 AP5B1Q2VPB7 878 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 MINDY4Q4G0A6 757 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 C10orf62Q5T681 223 aaPredicted RBP10.94□□□□□ -0.66
CTSA-209ENST00000493522 HHATQ5VTY9 493 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 TCTN3Q6NUS6 607 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 ABHD17CQ6PCB6 329 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 NUDCD3Q8IVD9 361 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 SRFBP1Q8NEF9 429 aaKnown RBP10.94□□□□□ -0.66
CTSA-209ENST00000493522 METTL6Q8TCB7 284 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 MGARPQ8TDB4 240 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 SMIM10Q96HG1 83 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 QRFPRQ96P65 431 aa10.94□□□□□ -0.66
CTSA-209ENST00000493522 KCNC2Q96PR1 638 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms