RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ALPK2	Q86TB3	2170 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602		A0A0A6YYK5	440 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	LOC100653049	A0A140TA62	436 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602		A0A1W2PP18	115 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	HACD1	B0YJ81	288 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	C16orf97	H3BN30	126 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	TRIM77	I1YAP6	450 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	TXNDC9	O14530	226 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	P2RX6	O15547	441 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	KLF4	O43474	513 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	KRT34	O76011	436 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	RCBTB2	O95199	551 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	EPO	P01588	193 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	THBS1	P07996	1170 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	GSTM1	P09488	218 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	DANCR	P0C864	163 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	USF1	P22415	310 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	KDELR1	P24390	212 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	CMPK1	P30085	196 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	CCKAR	P32238	428 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	PIGA	P37287	484 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SOX3	P41225	446 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	KCNJ5	P48544	419 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	CSE1L	P55060	971 aa	Known RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	DSCR9	P59020	149 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	GSTM4	Q03013	218 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	RCAN2	Q14206	197 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SIRPB2	Q5JXA9	342 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	ITPRIPL1	Q6GPH6	555 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	RTL4	Q6ZR62	310 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	PID1	Q7Z2X4	250 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	PCGF5	Q86SE9	256 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	PEG10	Q86TG7	708 aa	Known RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	DCUN1D3	Q8IWE4	304 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	APCDD1L	Q8NCL9	501 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	NFAM1	Q8NET5	270 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	NUP43	Q8NFH3	380 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	OR4K2	Q8NGD2	314 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	OR2A1	Q8NGT9	310 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	OR6P1	Q8NGX9	317 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SMAP2	Q8WU79	429 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SREK1	Q8WXA9	508 aa	Known RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	RAPGEF5	Q92565	580 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	FBXW5	Q969U6	566 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	MRPL24	Q96A35	216 aa	Known RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	REPS1	Q96D71	796 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	PLPPR2	Q96GM1	343 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SCYL1	Q96KG9	808 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	JSRP1	Q96MG2	331 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	PTCHD1	Q96NR3	888 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	RNF157	Q96PX1	679 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	OR2A5	Q96R48	311 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	CCDC77	Q9BR77	488 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	AARSD1	Q9BTE6	412 aa	Known RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	BHLHE41	Q9C0J9	482 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SLC25A51	Q9H1U9	297 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	TSPY26P	Q9H489	355 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	ALG2	Q9H553	416 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	LANCL2	Q9NS86	450 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	MED29	Q9NX70	200 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	ZDHHC3	Q9NYG2	299 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	SAMD15	Q9P1V8	674 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	FAM153A	Q9UHL3	310 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	ING1	Q9UK53	422 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	HYOU1	Q9Y4L1	999 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	ATG4B	Q9Y4P1	393 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	ARL5A	Q9Y689	179 aa		4.91	□□□□□ -1.62
SEC13-219	ENST00000492602	LOC285095	A0A1B0GVY8	99 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SLC5A10	A0PJK1	596 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	C5orf60	A6NFR6	353 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	LRRC14B	A6NHZ5	514 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	C3orf70	A6NLC5	250 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	AGAP14	A8MT82	685 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602		H7C0C1	242 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	WWP2	O00308	870 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	MSTN	O14793	375 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	PSMD3	O43242	534 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	PRKN	O60260	465 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	PHF2	O75151	1096 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	RDH16	O75452	317 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ZFAND5	O76080	213 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	TJP3	O95049	919 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	CRTAM	O95727	393 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	KRT1	P04264	644 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	RPN2	P04844	631 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	CCL3	P10147	92 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ARAF	P10398	606 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ITGAL	P20701	1170 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	MAGEA1	P43355	309 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	SLCO1A2	P46721	670 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	ATP5O	P48047	213 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	CDKN1C	P49918	316 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	GEM	P55040	296 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	COPS2	P61201	443 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	DYNLT1	P63172	113 aa		4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	IFI35	P80217	286 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC13-219	ENST00000492602	XIAP	P98170	497 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms