RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TMBIM6P55061 237 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 PPIGQ13427 754 aaKnown RBP eCLIP11.89□□□□□ -0.515e-19■■□□□ 12
HMGN1-220ENST00000492280 DUSP7Q16829 419 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 LEXMQ3ZCV2 418 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 BCL7AQ4VC05 210 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 GCNT6Q5T4J0 391 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 FAM71E1Q6IPT2 247 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 KLHL17Q6TDP4 642 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 LGI4Q8N135 537 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 TERB1Q8NA31 727 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 OR10G2Q8NGC3 310 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 GIPC3Q8TF64 312 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 SUSD6Q92537 303 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 RORBQ92753 470 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ASB16Q96NS5 453 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 TUBA1CQ9BQE3 449 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 FAM83CQ9BQN1 747 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 EFCAB11Q9BUY7 163 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ZCCHC2Q9C0B9 1178 aaKnown RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ROGDIQ9GZN7 287 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 GABARAPL1Q9H0R8 117 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ENPP5Q9UJA9 477 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 RNF6Q9Y252 685 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 CXorf51AA0A1B0GTR3 108 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 OR52A4PA6NMU1 304 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 BCHEP06276 602 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 IGFBP1P08833 259 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 INHBBP09529 407 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 IL1RNP18510 177 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 MAT2AP31153 395 aaKnown RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 PCGF2P35227 344 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 C21orf59P57076 290 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 GABARAPL2P60520 117 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 SELENOWP63302 87 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 VEZF1Q14119 521 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ANXA8L1Q5VT79 327 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 AMZ2Q86W34 360 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 LAS2Q8IYD9 372 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 ABHD11Q8NFV4 315 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 OR2L2Q8NH16 312 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 LRIG1Q96JA1 1093 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 PRSS16Q9NQE7 514 aa11.89□□□□□ -0.51
HMGN1-220ENST00000492280 TEX10Q9NXF1 929 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-220ENST00000492280 A0A1W2PP55 124 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 A0A1W2PS29 197 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ANKRD33BA6NCL7 494 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 UGT2B11O75310 529 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 JRKO75564 520 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 FGF19O95750 216 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 POU1F1P28069 291 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 FEN1P39748 380 aaKnown RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CRISP3P54108 245 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CDK6Q00534 326 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 NR1D2Q14995 579 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CLCA4Q14CN2 919 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 HIST2H2ACQ16777 129 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 WSCD2Q2TBF2 565 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 RFX4Q33E94 735 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PAGE2BQ5JRK9 111 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 HIST2H2AA3Q6FI13 130 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 RBM45Q8IUH3 476 aaKnown RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 NRSN1Q8IZ57 195 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 VANGL1Q8TAA9 524 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PLEKHA8Q96JA3 519 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 RNF167Q9H6Y7 350 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CTPS2Q9NRF8 586 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 IMP3Q9NV31 184 aaKnown RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 MUC22E2RYF6 1773 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 COL4A3Q01955 1670 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SPTBP11277 2137 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 NUP210Q8TEM1 1887 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 BOLA2-SMG1P6H3BVE0 249 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 B4GALT2O60909 372 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 DRD3P35462 400 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 TAS2R38P59533 333 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CDK3Q00526 305 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 FAHD1Q6P587 224 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SLCO6A1Q86UG4 719 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 METTL4Q8N3J2 472 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 HORMAD2Q8N7B1 307 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 LINC01555Q8NAE3 123 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF717Q9BY31 904 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PLA2G2FQ9BZM2 168 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 BHLHE41Q9C0J9 482 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 TMEM245Q9H330 911 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 C1GALT1Q9NS00 363 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 GPR83Q9NYM4 423 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 TAS2R9Q9NYW1 312 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ATP6V1HQ9UI12 483 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SLC27A6Q9Y2P4 619 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ARHGEF17Q96PE2 2063 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ANKDD1BA6NHY2 528 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PSMD11O00231 422 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms