RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 WWOXQ9NZC7 414 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 KCMF1Q9P0J7 381 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 FBXW2Q9UKT8 454 aa8.31□□□□□ -1.08
HDAC3-211ENST00000491581 DOPEY1Q5JWR5 2465 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 A0A1B0GTH9 108 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 A0A1B0GUH1 482 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 HMX2A2RU54 273 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ASPDHA6ND91 283 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 WWP2O00308 870 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ASNA1O43681 348 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 HS6ST1O60243 411 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 NME2P1O60361 137 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 CDC40O60508 579 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 CCNT2O60583 730 aaKnown RBP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ITGA10O75578 1167 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 OR6B1O95007 311 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 LRATO95237 230 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 TGFB1P01137 390 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 SERPINA6P08185 405 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 POU3F2P20265 443 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 NME2P22392 152 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 HTR1EP28566 365 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 TNFRSF8P28908 595 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 PIK3CGP48736 1102 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 GPR143P51810 404 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 PLTPP55058 493 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 LIM2P55344 173 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 SLC13A2Q13183 592 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF750Q32MQ0 723 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 TMIGD1Q6UXZ0 262 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 QSOX2Q6ZRP7 698 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ABHD13Q7L211 337 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 DOLPP1Q86YN1 238 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 SCUBE1Q8IWY4 988 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 CTAGE3PQ8IX95 158 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 NKAPQ8N5F7 415 aaKnown RBP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 SLC5A8Q8N695 610 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 PPM1NQ8N819 430 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 SPATA4Q8NEY3 305 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 OR52N2Q8NGI0 321 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 FBXO25Q8TCJ0 367 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 FBF1Q8TES7 1133 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 AGAP11Q8TF27 550 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 PYROXD1Q8WU10 500 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 KCTD4Q8WVF5 259 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ATL1Q8WXF7 558 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 PPWD1Q96BP3 646 aaKnown RBP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 NXNL1Q96CM4 212 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 GPR22Q99680 433 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 DEFB127Q9H1M4 99 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 PRDM7Q9NQW5 492 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 IGSF5Q9NSI5 407 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF358Q9NW07 568 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 CD274Q9NZQ7 290 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 TEKT2Q9UIF3 430 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 CORO1CQ9ULV4 474 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF835Q9Y2P0 537 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 LIPGQ9Y5X9 500 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 KCNE2Q9Y6J6 123 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDAC3-211ENST00000491581 GTF3C1Q12789 2109 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 KIAA1549Q9HCM3 1950 aa8.3□□□□□ -1.08
HDAC3-211ENST00000491581 HCFC1P51610 2035 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PDZD2O15018 2839 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 FAM159BA6NKW6 160 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 FAM166BA8MTA8 275 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CCDC188H7C350 402 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PSMD12O00232 456 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CYR61O00622 381 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 OR2J2O76002 312 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ETHE1O95571 254 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CRYABP02511 175 aaKnown RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CELA3AP09093 270 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 SLC35E2BP0CK96 405 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PCNAP12004 261 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CD46P15529 392 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 GNAZP19086 355 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 TFEBP19484 476 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 JAK1P23458 1154 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 MSH2P43246 934 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 PER3P56645 1201 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CDKL1Q00532 357 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 CHIT1Q13231 466 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 DDX39BQ13838 428 aaKnown RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 FRG1Q14331 258 aaKnown RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 SLMAPQ14BN4 828 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ZKSCAN8Q15776 578 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 INAQ16352 499 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ABHD17CQ6PCB6 329 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 IL20RBQ6UXL0 311 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 SYT10Q6XYQ8 523 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 C3orf62Q6ZUJ4 267 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 SYDE1Q6ZW31 735 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 RPS27LQ71UM5 84 aaKnown RBP8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ADAMTSL2Q86TH1 951 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 TICAM1Q8IUC6 712 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 SPPL2CQ8IUH8 684 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
HDAC3-211ENST00000491581 TRPV3Q8NET8 790 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms