RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CD244Q9BZW8 370 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 PITHD1Q9GZP4 211 aaPredicted RBP9.7□□□□□ -0.86
RBM39-236ENST00000490484 NT5DC2Q9H857 520 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 COPS7BQ9H9Q2 264 aaPredicted RBP9.7□□□□□ -0.86
RBM39-236ENST00000490484 NMRAL1Q9HBL8 299 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 SNX15Q9NRS6 342 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 ZDHHC18Q9NUE0 388 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 PTBP2Q9UKA9 531 aaKnown RBP9.7□□□□□ -0.86
RBM39-236ENST00000490484 MMACHCQ9Y4U1 282 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 TEX15Q9BXT5 2789 aa9.7□□□□□ -0.86
RBM39-236ENST00000490484 TRBV11-1A0A0K0K1C0 115 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 STSP08842 583 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 PCNAP12004 261 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 CD46P15529 392 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 COL8A1P27658 744 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 TPP2P29144 1249 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 EEF1DP29692 281 aaKnown RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 PPP2R1BP30154 601 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 HPDP32754 393 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 CD96P40200 585 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 MSH2P43246 934 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 HNRNPFP52597 415 aaKnown RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 MTTPP55157 894 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 PER3P56645 1201 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 RAB38P57729 211 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 WHAMMP3Q1A5X7 153 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 ADPRMQ3LIE5 342 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 CRYBG3Q68DQ2 2970 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 ABHD17CQ6PCB6 329 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 ZGRF1Q86YA3 2104 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 MYLK4Q86YV6 388 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 SCUBE1Q8IWY4 988 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 CENPLQ8N0S6 344 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 TMEM52Q8NDY8 209 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 ADAMTS18Q8TE60 1221 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 UBTD2Q8WUN7 234 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 NXNL1Q96CM4 212 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 WDR34Q96EX3 536 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 QRFPRQ96P65 431 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 SERINC2Q96SA4 455 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 ATOH8Q96SQ7 321 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 NPLQ9BXD5 320 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 TSPAN10Q9H1Z9 355 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 CDCP1Q9H5V8 836 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 PRTFDC1Q9NRG1 225 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 PNO1Q9NRX1 252 aaKnown RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 NINJ2Q9NZG7 142 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 OPTCQ9UBM4 332 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 SEC14L3Q9UDX4 400 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 ZNF490Q9ULM2 529 aaPredicted RBP9.69□□□□□ -0.86
RBM39-236ENST00000490484 ACOT9Q9Y305 439 aa9.69□□□□□ -0.86
RBM39-236ENST00000490484 NOTCH2Q04721 2471 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 DIDO1Q9BTC0 2240 aaKnown RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 A0A087X1B8 175 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 A0A096LPK6 155 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 HMX2A2RU54 273 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 K7EPI3 171 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 CLDN4O14493 209 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 SH3BGRLO75368 114 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 SLC25A12O75746 678 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 NEURL1O76050 574 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 ACSL3O95573 720 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 C2P06681 752 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 PHBP35232 272 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 SERPINB8P50452 374 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 LIM2P55344 173 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 TGM3Q08188 693 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 LAPTM5Q13571 262 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 TBCCQ15814 346 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 HIST2H2ACQ16777 129 aaPredicted RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 ZNF468Q5VIY5 522 aaPredicted RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 HIST2H2AA3Q6FI13 130 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 MED27Q6P2C8 311 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 GALNTL5Q7Z4T8 443 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 RPS19BP1Q86WX3 136 aaKnown RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 HORMAD2Q8N7B1 307 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 TMEM178AQ8NBL3 297 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 NOA1Q8NC60 698 aaKnown RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 NFAM1Q8NET5 270 aaPredicted RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 B3GNT7Q8NFL0 401 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 DNAJB8Q8NHS0 232 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 THAP3Q8WTV1 239 aaPredicted RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 SCMH1Q96GD3 660 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 FRMD6Q96NE9 622 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 KCNC2Q96PR1 638 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 F2RL3Q96RI0 385 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 MS4A8Q9BY19 250 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 LRFN1Q9P244 771 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 MTRF1LQ9UGC7 380 aaKnown RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 SH3BGRL2Q9UJC5 107 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 DAPP1Q9UN19 280 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 MRPS33Q9Y291 106 aaKnown RBP9.68□□□□□ -0.86
RBM39-236ENST00000490484 CLDN16Q9Y5I7 305 aa9.68□□□□□ -0.86
RBM39-236ENST00000490484 TRGV8A0A0C4DH27 118 aa9.67□□□□□ -0.86
RBM39-236ENST00000490484 A0A1B0GUH1 482 aa9.67□□□□□ -0.86
RBM39-236ENST00000490484 SAP18O00422 153 aaKnown RBP9.67□□□□□ -0.86
RBM39-236ENST00000490484 RTCAO00442 366 aaKnown RBP9.67□□□□□ -0.86
RBM39-236ENST00000490484 FCHO1O14526 889 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms