RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 MS4A8Q9BY19 250 aa18.53■□□□□ 0.56
SMC4-222ENST00000490207 NECTIN3Q9NQS3 549 aa18.53■□□□□ 0.56
SMC4-222ENST00000490207 STMN3Q9NZ72 180 aa18.53■□□□□ 0.56
SMC4-222ENST00000490207 ABI3Q9P2A4 366 aa18.53■□□□□ 0.56
SMC4-222ENST00000490207 CPSF2Q9P2I0 782 aaKnown RBP18.53■□□□□ 0.56
SMC4-222ENST00000490207 ANGPTL3Q9Y5C1 460 aa18.53■□□□□ 0.56
SMC4-222ENST00000490207 HECTD1Q9ULT8 2610 aa18.53■□□□□ 0.56
SMC4-222ENST00000490207 RP1L1Q8IWN7 2480 aaPredicted RBP18.52■□□□□ 0.56
SMC4-222ENST00000490207 LRRK2Q5S007 2527 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 A0A087WUV0 522 aaPredicted RBP18.52■□□□□ 0.56
SMC4-222ENST00000490207 POC1B-GALNT4F8VUJ3 575 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 E2F3O00716 465 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 ALDH18A1P54886 795 aaKnown RBP18.52■□□□□ 0.56
SMC4-222ENST00000490207 MTTPP55157 894 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 MEP1AQ16819 746 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 PFKFB4Q16877 469 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 ACER2Q5QJU3 275 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 GRHL2Q6ISB3 625 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 LAS2Q8IYD9 372 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 SLC5A8Q8N695 610 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 FAM47BQ8NA70 645 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 ST6GALNAC3Q8NDV1 305 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 SUN3Q8TAQ9 357 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 UHMK1Q8TAS1 419 aaKnown RBP18.52■□□□□ 0.56
SMC4-222ENST00000490207 ZNF473Q8WTR7 871 aaKnown RBP18.52■□□□□ 0.56
SMC4-222ENST00000490207 GPR78Q96P69 363 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 F2RL3Q96RI0 385 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 PRTFDC1Q9NRG1 225 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 NFU1Q9UMS0 254 aa18.52■□□□□ 0.56
SMC4-222ENST00000490207 MRPS33Q9Y291 106 aaKnown RBP18.52■□□□□ 0.56
SMC4-222ENST00000490207 KLK8O60259 260 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 KRT38O76015 456 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 CNTFP26441 200 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 SERPINB1P30740 379 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 PCDH1Q08174 1060 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 SCUBE1Q8IWY4 988 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 PLD6Q8N2A8 252 aaKnown RBP18.51■□□□□ 0.55
SMC4-222ENST00000490207 BCORP1Q8N888 145 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 SRFBP1Q8NEF9 429 aaKnown RBP18.51■□□□□ 0.55
SMC4-222ENST00000490207 ELP5Q8TE02 316 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 FAR1Q8WVX9 515 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 KCNC2Q96PR1 638 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 NPAS2Q99743 824 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 ROGDIQ9GZN7 287 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 ZNF180Q9UJW8 692 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 DAPP1Q9UN19 280 aa18.51■□□□□ 0.55
SMC4-222ENST00000490207 USP9XQ93008 2570 aaPredicted RBP18.5■□□□□ 0.55
SMC4-222ENST00000490207 BLACEA4D250 179 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 LRRC14BA6NHZ5 514 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 A8MUA0 341 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 PRAMEF2O60811 474 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 SEMA7AO75326 666 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 EDN3P14138 238 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 HNRNPFP52597 415 aaKnown RBP18.5■□□□□ 0.55
SMC4-222ENST00000490207 LIM2P55344 173 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 HSD17B7P56937 341 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 RCN2Q14257 317 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 PCBP2Q15366 365 aaKnown RBP eCLIP18.5■□□□□ 0.55
SMC4-222ENST00000490207 MYLK4Q86YV6 388 aaPredicted RBP18.5■□□□□ 0.55
SMC4-222ENST00000490207 IFT20Q8IY31 132 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 ZNF595Q8IYB9 648 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 KIF2BQ8N4N8 673 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 TMEM52Q8NDY8 209 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 OR7G3Q8NG95 312 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 DCAKDQ8WVC6 231 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 CSF3RQ99062 836 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 PRDM7Q9NQW5 492 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 OLAHQ9NV23 265 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 ZNF358Q9NW07 568 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 XPR1Q9UBH6 696 aa18.5■□□□□ 0.55
SMC4-222ENST00000490207 EXOC1LA0A1B0GW35 172 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 GABRR3A8MPY1 467 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 TRIM49D1C9J1S8 452 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 CLDN4O14493 209 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 MAN1A2O60476 641 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 SH3BGRLO75368 114 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 ABHD2P08910 425 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 MYBL2P10244 700 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 PIK3CGP48736 1102 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 SLC13A2Q13183 592 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 TUBA3CQ13748 450 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 DDX39BQ13838 428 aaKnown RBP18.49■□□□□ 0.55
SMC4-222ENST00000490207 GTF2H2Q13888 395 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 TSNAXIP1Q2TAA8 658 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 GTF2H2CQ6P1K8 395 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 TUBA3EQ6PEY2 450 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 ZNF793Q6ZN11 406 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 GOLGA7Q7Z5G4 137 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 LGI4Q8N135 537 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 PTGR2Q8N8N7 351 aaPredicted RBP18.49■□□□□ 0.55
SMC4-222ENST00000490207 SSC4DQ8WTU2 575 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 CMTM7Q96FZ5 175 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 SCYL1Q96KG9 808 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 TAAR6Q96RI8 345 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 SLX1AQ9BQ83 275 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 UTP23Q9BRU9 249 aaKnown RBP18.49■□□□□ 0.55
SMC4-222ENST00000490207 TBCDQ9BTW9 1192 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 ACTR8Q9H981 624 aa18.49■□□□□ 0.55
SMC4-222ENST00000490207 PNO1Q9NRX1 252 aaKnown RBP18.49■□□□□ 0.55
SMC4-222ENST00000490207 ADGRE2Q9UHX3 823 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms