RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 FOXA1P55317 472 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 LCP2Q13094 533 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 DEPDC1Q5TB30 811 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 KHDRBS2Q5VWX1 349 aaKnown RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 LIPMQ5VYY2 423 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CES4AQ5XG92 561 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 FRG2Q64ET8 278 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 TRIM40Q6P9F5 258 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 BORAQ6PGQ7 559 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 ATG14Q6ZNE5 492 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 FRMD7Q6ZUT3 714 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 GPRIN3Q6ZVF9 776 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CA13Q8N1Q1 262 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CDYL2Q8N8U2 506 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 EXD3Q8N9H8 876 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 AGAP11Q8TF27 550 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 THAP4Q8WY91 577 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 C8orf44Q96CB5 159 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CCDC126Q96EE4 140 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CMTM7Q96FZ5 175 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CATSPER2Q96P56 530 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 FRG2BQ96QU4 278 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 GATA5Q9BWX5 397 aaPredicted RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 ZNF717Q9BY31 904 aaPredicted RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 SHCBP1LQ9BZQ2 653 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 IQCGQ9H095 443 aaKnown RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 P4HTMQ9NXG6 502 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 SENP1Q9P0U3 644 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MKL2Q9ULH7 1088 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MAN2B2Q9Y2E5 1009 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 TIMM22Q9Y584 194 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 FOXE1O00358 373 aaPredicted RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 TRIM13O60858 407 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 B4GALT2O60909 372 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MLYCDO95822 493 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 PDYNP01213 254 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CHN1P15882 459 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 ATP5A1P25705 553 aaKnown RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 ARRB2P32121 409 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MAGEA8P43361 318 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 HTR6P50406 440 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 HNRNPFP52597 415 aaKnown RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 EMP2P54851 167 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 BTG2P78543 158 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 RHAGQ02094 409 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 RHDQ02161 417 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 LY6DQ14210 128 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MINDY4Q4G0A6 757 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MFSD4BQ5TF39 518 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 TTC19Q6DKK2 380 aaPredicted RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 ZCCHC23Q6ZST2 131 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 LANCL3Q6ZV70 420 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 RAB43Q86YS6 212 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 ACOT4Q8N9L9 421 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 TMEM52Q8NDY8 209 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 APOBEC4Q8WW27 367 aaKnown RBP7.41□□□□□ -1.22
SSR1-210ENST00000489567 TBC1D20Q96BZ9 403 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 FAR2Q96K12 515 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CSF3RQ99062 836 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 SEMA4CQ9C0C4 833 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 ING2Q9H160 280 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 CXorf56Q9H5V9 222 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 TMBIM4Q9HC24 238 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 MID1IP1Q9NPA3 183 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 SEMA3GQ9NS98 782 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 C14orf105Q9NVL8 296 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 TRPS1Q9UHF7 1281 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 FBXL4Q9UKA2 621 aa7.41□□□□□ -1.22
SSR1-210ENST00000489567 IGHV3-20A0A0C4DH32 117 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 K7EM74 188 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 ERVH48-1M5A8F1 160 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 MANBAO00462 879 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 EEDO75530 441 aaKnown RBP7.4□□□□□ -1.23
SSR1-210ENST00000489567 SCELO95171 688 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 ESRRBO95718 433 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 GBAP04062 536 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 CHRNGP07510 517 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 HEXBP07686 556 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 FHP07954 510 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 MYZAPP0CAP1 466 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 HIST1H1TP22492 207 aaPredicted RBP7.4□□□□□ -1.23
SSR1-210ENST00000489567 PTX3P26022 381 aaPredicted RBP7.4□□□□□ -1.23
SSR1-210ENST00000489567 SERPINB1P30740 379 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 BSGP35613 385 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 MTTPP55157 894 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 LIM2P55344 173 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 POLE2P56282 527 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 TMEM35AQ53FP2 167 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 SCIMPQ6UWF3 145 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 CHSY3Q70JA7 882 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 FAM47BQ8NA70 645 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 BOD1L1Q8NFC6 3051 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 OR11G2Q8NGC1 345 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 SELENOMQ8WWX9 145 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 TSLPQ969D9 159 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 ARL8AQ96BM9 186 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 TLCD1Q96CP7 247 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 REPS1Q96D71 796 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 KCNC2Q96PR1 638 aa7.4□□□□□ -1.23
SSR1-210ENST00000489567 OR1F2PQ96R84 312 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms