RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZNF611Q8N823 705 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 INTS12Q96CB8 462 aaKnown RBP13.77□□□□□ -0.21
UFD1-209ENST00000489406 PDLIM2Q96JY6 352 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 JSRP1Q96MG2 331 aaPredicted RBP13.77□□□□□ -0.21
UFD1-209ENST00000489406 QRFPRQ96P65 431 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 TTC1Q99614 292 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 PIGMQ9H3S5 423 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 ARNT2Q9HBZ2 717 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 QPCTLQ9NXS2 382 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 CTTNBP2NLQ9P2B4 639 aa13.77□□□□□ -0.21
UFD1-209ENST00000489406 BOKQ9UMX3 212 aaPredicted RBP13.77□□□□□ -0.21
UFD1-209ENST00000489406 PPIEQ9UNP9 301 aaKnown RBP13.77□□□□□ -0.21
UFD1-209ENST00000489406 LRRC3CA6NJW4 275 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 SMAPO00193 183 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 CST8O60676 142 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 GALR3O60755 368 aaPredicted RBP13.76□□□□□ -0.21
UFD1-209ENST00000489406 PPP2R1BP30154 601 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 SLCO1A2P46721 670 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 HK2P52789 917 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 MTTPP55157 894 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 PRPSAP1Q14558 356 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 HERC3Q15034 1050 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 TERF2Q15554 542 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 DEFB134Q4QY38 66 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 THEMIS2Q5TEJ8 643 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 VASNQ6EMK4 673 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 ITPRIPL1Q6GPH6 555 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.76□□□□□ -0.21
UFD1-209ENST00000489406 SLC13A3Q8WWT9 602 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 HAUS1Q96CS2 278 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.21
UFD1-209ENST00000489406 FAM111AQ96PZ2 611 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 RHBGQ9H310 441 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 FEZ2Q9UHY8 353 aaPredicted RBP13.76□□□□□ -0.21
UFD1-209ENST00000489406 SLC6A5Q9Y345 797 aa13.76□□□□□ -0.21
UFD1-209ENST00000489406 LMX1BO60663 402 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 MATN4O95460 622 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 GDF1P27539 372 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 COILP38432 576 aaPredicted RBP13.75□□□□□ -0.21
UFD1-209ENST00000489406 CDKN1AP38936 164 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 ARHGAP19Q14CB8 494 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 ODF2Q5BJF6 829 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 ADGRD1Q6QNK2 874 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 OPN5Q6U736 354 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 MFSD7Q6UXD7 560 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 C22orf34Q6ZV56 151 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 GCNT2Q8N0V5 402 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 P3H4Q92791 437 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 GTPBP3Q969Y2 492 aaKnown RBP13.75□□□□□ -0.21
UFD1-209ENST00000489406 WDYHV1Q96HA8 205 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 TNFRSF13CQ96RJ3 184 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 PKP4Q99569 1192 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 TMEM184CQ9NVA4 438 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 LIMA1Q9UHB6 759 aaKnown RBP13.75□□□□□ -0.21
UFD1-209ENST00000489406 PACSIN3Q9UKS6 424 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 PCDHA13Q9Y5I0 950 aa13.75□□□□□ -0.21
UFD1-209ENST00000489406 PRKDCP78527 4128 aaKnown RBP13.75□□□□□ -0.21
UFD1-209ENST00000489406 TRRAPQ9Y4A5 3859 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 E7ENX8 843 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 OVOL3O00110 214 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 HS3ST1O14792 307 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 TCF21O43680 179 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 LCMT2O60294 686 aaKnown RBP13.74□□□□□ -0.21
UFD1-209ENST00000489406 NDUFS7O75251 213 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 TRAPPC6AO75865 159 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 IGHV4-39P01824 125 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 ZNF16P17020 682 aaPredicted RBP13.74□□□□□ -0.21
UFD1-209ENST00000489406 IGFBP5P24593 272 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 RBL1P28749 1068 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 VLDLRP98155 873 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 RCAN2Q14206 197 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 SEMA3AQ14563 771 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 DCST1Q5T197 706 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 SLC22A10Q63ZE4 541 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 PTRHD1Q6GMV3 140 aaKnown RBP13.74□□□□□ -0.21
UFD1-209ENST00000489406 CAPN13Q6MZZ7 669 aaPredicted RBP13.74□□□□□ -0.21
UFD1-209ENST00000489406 HSDL2Q6YN16 418 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 SH2D5Q6ZV89 423 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 DEPDC4Q8N2C3 294 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 AFAP1L2Q8N4X5 818 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 ZNF740Q8NDX6 193 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 ZNF480Q8WV37 535 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 THAP11Q96EK4 314 aa13.74□□□□□ -0.21
UFD1-209ENST00000489406 PIH1D1Q9NWS0 290 aaKnown RBP13.74□□□□□ -0.21
UFD1-209ENST00000489406 IGHV4-30-2A0A087WSY4 118 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 A0A096LNT2 108 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.73□□□□□ -0.21
UFD1-209ENST00000489406 MYO1CO00159 1063 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 PSMD12O00232 456 aaPredicted RBP13.73□□□□□ -0.21
UFD1-209ENST00000489406 SMNDC1O75940 238 aaKnown RBP eCLIP13.73□□□□□ -0.21
UFD1-209ENST00000489406 RCBTB2O95199 551 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 ACSL3O95573 720 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 SLC16A8O95907 504 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 GOT2P00505 430 aaKnown RBP13.73□□□□□ -0.21
UFD1-209ENST00000489406 SLC35G6P0C7Q6 338 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 ITGA2P17301 1181 aa13.73□□□□□ -0.21
UFD1-209ENST00000489406 CCKARP32238 428 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms