RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SMIM10L1P0DMW3 83 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 CD1EP15812 388 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 ZNF37AP17032 561 aaPredicted RBP8.72□□□□□ -1.01
SNX17-207ENST00000489402 GNAZP19086 355 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 GSTM2P28161 218 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 HNMTP50135 292 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 HSD17B7P56937 341 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 RAB38P57729 211 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 RCN2Q14257 317 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 TESK1Q15569 626 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 BBS9Q3SYG4 887 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 MSS51Q4VC12 460 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 TEDDM1Q5T9Z0 273 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 SBSNQ6UWP8 590 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 ACAD11Q709F0 780 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 MDGA2Q7Z553 956 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 TMEM200AQ86VY9 491 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 LRRC8AQ8IWT6 810 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 SCUBE1Q8IWY4 988 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 TMEM132CQ8N3T6 1108 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 MARVELD2Q8N4S9 558 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 OR5M3Q8NGP4 307 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 LILRB4Q8NHJ6 448 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 CREB3L4Q8TEY5 395 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 SREK1Q8WXA9 508 aaKnown RBP8.72□□□□□ -1.01
SNX17-207ENST00000489402 NCLNQ969V3 563 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 CFAP36Q96G28 342 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 PDLIM5Q96HC4 596 aaKnown RBP8.72□□□□□ -1.01
SNX17-207ENST00000489402 SMIM10Q96HG1 83 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 ZNF559Q9BR84 538 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 NPLQ9BXD5 320 aaPredicted RBP8.72□□□□□ -1.01
SNX17-207ENST00000489402 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 ADAP2Q9NPF8 381 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 KCMF1Q9P0J7 381 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 PPIEQ9UNP9 301 aaKnown RBP8.72□□□□□ -1.01
SNX17-207ENST00000489402 RNF6Q9Y252 685 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 MED13LQ71F56 2210 aa8.72□□□□□ -1.01
SNX17-207ENST00000489402 A0A0G2JN53 185 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 NKX2-6A6NCS4 301 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 OR2J2O76002 312 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 WDR47O94967 919 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 IFNA16P05015 189 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 C1GALT1C1LP0DN25 315 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 IGFBP2P18065 325 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 MSX1P28360 303 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 PPIAP62937 165 aaKnown RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 CCZ1BP86790 482 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 CCZ1P86791 482 aaPredicted RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 CDKL1Q00532 357 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 BMPR2Q13873 1038 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 RUNX2Q13950 521 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 SLBPQ14493 270 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNX17-207ENST00000489402 ELAVL1Q15717 326 aaKnown RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 PPP1R3AQ16821 1122 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 CES4AQ5XG92 561 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 TRIM40Q6P9F5 258 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 TMIGD1Q6UXZ0 262 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 C16orf47Q6ZP98 133 aaPredicted RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 RGS9BPQ6ZS82 235 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 GK5Q6ZS86 529 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 ADAMTSL2Q86TH1 951 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 SLC22A16Q86VW1 577 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.71□□□□□ -1.02
SNX17-207ENST00000489402 ZNF595Q8IYB9 648 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 CLYBLQ8N0X4 340 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 PDIK1LQ8N165 341 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 KRT78Q8N1N4 520 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 NKAPQ8N5F7 415 aaKnown RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 FAM47BQ8NA70 645 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 OR52N2Q8NGI0 321 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 ACTRT1Q8TDG2 376 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 ANKRD7Q92527 254 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 DAZLQ92904 295 aaKnown RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 SEC16BQ96JE7 1060 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 DEFB127Q9H1M4 99 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 COPS7BQ9H9Q2 264 aaPredicted RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 ZNF223Q9UK11 482 aaPredicted RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 CHMP2BQ9UQN3 213 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 OARD1Q9Y530 152 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 CLCA3PQ9Y6N3 262 aa8.71□□□□□ -1.02
SNX17-207ENST00000489402 SETD2Q9BYW2 2564 aaPredicted RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 PHF3Q92576 2039 aaKnown RBP8.71□□□□□ -1.02
SNX17-207ENST00000489402 C2CD3Q4AC94 2353 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 HRNRQ86YZ3 2850 aaPredicted RBP8.7□□□□□ -1.02
SNX17-207ENST00000489402 FAM95CA0A1B0GW59 222 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 OR14I1A6ND48 311 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 LRIT2A6NDA9 550 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 ANKDD1BA6NHY2 528 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 FAM166BA8MTA8 275 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 NPIPA2E9PIF3 369 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 NPIPA3F8WFD2 350 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 CDC7O00311 574 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 BCKDKO14874 412 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 TOXO94900 526 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 PPP2R1BP30154 601 aa8.7□□□□□ -1.02
SNX17-207ENST00000489402 HNRNPH1P31943 449 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms