RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 A0A096LPK6 155 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 SAP18O00422 153 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 RTCAO00442 366 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 MYO1DO94832 1006 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 RASAL1O95294 804 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 LDLRP01130 860 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ALDOAP04075 364 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 MTHFD2P13995 350 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ECHS1P30084 290 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 PHBP35232 272 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 TDGF1P3P51864 188 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 LIM2P55344 173 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 RAB38P57729 211 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 TAS2R50P59544 299 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 OC90Q02509 493 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 SLC13A2Q13183 592 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 OR1C1Q15619 314 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 PFKFB4Q16877 469 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ADPRMQ3LIE5 342 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF324BQ6AW86 544 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ABHD17CQ6PCB6 329 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 UBE3DQ7Z6J8 389 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 MYLK4Q86YV6 388 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 PLD6Q8N2A8 252 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 SLC5A8Q8N695 610 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 TEX9Q8N6V9 391 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 NFAM1Q8NET5 270 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ELP5Q8TE02 316 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 THAP3Q8WTV1 239 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 UBTD2Q8WUN7 234 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 C5orf34Q96MH7 638 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 EFCAB11Q9BUY7 163 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 SORBS1Q9BX66 1292 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 PITHD1Q9GZP4 211 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 VPS11Q9H270 941 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ACSS3Q9H6R3 686 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 COPS7BQ9H9Q2 264 aaPredicted RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 PRTFDC1Q9NRG1 225 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF358Q9NW07 568 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 CPSF2Q9P2I0 782 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 MAST4O15021 2626 aa13.12□□□□□ -0.31
VTI1A-206ENST00000489142 DIDO1Q9BTC0 2240 aaKnown RBP13.12□□□□□ -0.31
VTI1A-206ENST00000489142 K7EPI3 171 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 LRRTM2O43300 516 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 CLDN1O95832 211 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 TGFB1P01137 390 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 CTAGE8P0CG41 777 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 GFAPP14136 432 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 COL8A1P27658 744 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 TPP2P29144 1249 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-206ENST00000489142 TYK2P29597 1187 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 SERPINB8P50452 374 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 LAPTM5Q13571 262 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 HIST2H2ACQ16777 129 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-206ENST00000489142 PAGE2BQ5JRK9 111 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 C1QL3Q5VWW1 255 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 HIST2H2AA3Q6FI13 130 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF793Q6ZN11 406 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 SCUBE1Q8IWY4 988 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 CTAGE4Q8IX94 777 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 MDS2Q8NDY4 140 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF473Q8WTR7 871 aaKnown RBP13.11□□□□□ -0.31
VTI1A-206ENST00000489142 NR4A3Q92570 626 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 GPR78Q96P69 363 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 SERINC2Q96SA4 455 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 FMO2Q99518 471 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 TSPAN10Q9H1Z9 355 aaPredicted RBP13.11□□□□□ -0.31
VTI1A-206ENST00000489142 CLK4Q9HAZ1 481 aaKnown RBP13.11□□□□□ -0.31
VTI1A-206ENST00000489142 PRDM7Q9NQW5 492 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 ABI3Q9P2A4 366 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 MMACHCQ9Y4U1 282 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 CLDN16Q9Y5I7 305 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 POLEQ07864 2286 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
VTI1A-206ENST00000489142 A0A088AWK7 358 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 TRBV11-1A0A0K0K1C0 115 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 SYCE1LA8MT33 242 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 POC1B-GALNT4F8VUJ3 575 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 KLHL2O95198 593 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 SIX3O95343 332 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-206ENST00000489142 ZNF10P21506 573 aaPredicted RBP13.1□□□□□ -0.31
VTI1A-206ENST00000489142 GSTM2P28161 218 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 MTTPP55157 894 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 ID2Q02363 134 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 SETDB1Q15047 1291 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 TBCCQ15814 346 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 INAQ16352 499 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 FAM83EQ2M2I3 478 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 MED27Q6P2C8 311 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 GFRALQ6UXV0 394 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 FJX1Q86VR8 437 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
VTI1A-206ENST00000489142 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
VTI1A-206ENST00000489142 OR7G3Q8NG95 312 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms