RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ABHD17CQ6PCB6 329 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 RPS19BP1Q86WX3 136 aaKnown RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 CENPLQ8N0S6 344 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 EXT2Q93063 718 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 SERINC2Q96SA4 455 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 LRRC1Q9BTT6 524 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 HES7Q9BYE0 225 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 CDCP1Q9H5V8 836 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 TRIM45Q9H8W5 580 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 PPIEQ9UNP9 301 aaKnown RBP11.75□□□□□ -0.53
SRRM1-216ENST00000489130 SCN2AQ99250 2005 aa11.75□□□□□ -0.53
SRRM1-216ENST00000489130 NAV2Q8IVL1 2488 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 A0A087X1B8 175 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 HMX2A2RU54 273 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 ASPDHA6ND91 283 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 SUPT3HB4E1H0 165 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 K7EPI3 171 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 CLDN4O14493 209 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 SUPT3HO75486 399 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 MTHFD2P13995 350 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 CD46P15529 392 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 TPP2P29144 1249 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-216ENST00000489130 HNRNPFP52597 415 aaKnown RBP11.74□□□□□ -0.53
SRRM1-216ENST00000489130 PLA2G16P53816 162 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 MTTPP55157 894 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 IRF8Q02556 426 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 TGM3Q08188 693 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 CHIT1Q13231 466 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 ZNF468Q5VIY5 522 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-216ENST00000489130 GFRALQ6UXV0 394 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 RELL1Q8IUW5 271 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 LAS2Q8IYD9 372 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 HORMAD2Q8N7B1 307 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 TMEM178AQ8NBL3 297 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 APCDD1LQ8NCL9 501 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 TMEM52Q8NDY8 209 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 B3GNT7Q8NFL0 401 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 RHEBL1Q8TAI7 183 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 RELTQ969Z4 430 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 NXNL1Q96CM4 212 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 C16orf45Q96MC5 204 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-216ENST00000489130 COPS7BQ9H9Q2 264 aaPredicted RBP11.74□□□□□ -0.53
SRRM1-216ENST00000489130 PRDM7Q9NQW5 492 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 PRTFDC1Q9NRG1 225 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 DAPP1Q9UN19 280 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 MRPS33Q9Y291 106 aaKnown RBP11.74□□□□□ -0.53
SRRM1-216ENST00000489130 ACOT9Q9Y305 439 aa11.74□□□□□ -0.53
SRRM1-216ENST00000489130 SYNDIG1LA6NDD5 238 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 SYCE1LA8MT33 242 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 TGFBR3LH3BV60 316 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 UBXN8O00124 270 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 CYR61O00622 381 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 URI1O94763 535 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 MYO1DO94832 1006 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 UNC5CO95185 931 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 C2P06681 752 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 CERS1P27544 350 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 EEF1DP29692 281 aaKnown RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 TRHRP34981 398 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 PHBP35232 272 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 MSH2P43246 934 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 ST13P50502 369 aaKnown RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 CLCN2P51788 898 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 LIM2P55344 173 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 MLF1P58340 268 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 IRF9Q00978 393 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 OC90Q02509 493 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 SRSF11Q05519 484 aaKnown RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 BMPR2Q13873 1038 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 RCN2Q14257 317 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 NAA30Q147X3 362 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 HIST2H2ACQ16777 129 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 FAM83EQ2M2I3 478 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 MROH9Q5TGP6 573 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 C1QL3Q5VWW1 255 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 HIST2H2AA3Q6FI13 130 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 UBE3DQ7Z6J8 389 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 FAM47BQ8NA70 645 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 SRFBP1Q8NEF9 429 aaKnown RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 ZNF473Q8WTR7 871 aaKnown RBP11.73□□□□□ -0.53
SRRM1-216ENST00000489130 KCTD4Q8WVF5 259 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 UBE2E3Q969T4 207 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 FRMD6Q96NE9 622 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 KCNC2Q96PR1 638 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 F2RL3Q96RI0 385 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 CSF3RQ99062 836 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 MS4A8Q9BY19 250 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 FUT8Q9BYC5 575 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 KLHL1Q9NR64 748 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 SNX15Q9NRS6 342 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 LRFN1Q9P244 771 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 OPTCQ9UBM4 332 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 SEC14L3Q9UDX4 400 aa11.73□□□□□ -0.53
SRRM1-216ENST00000489130 TRBV11-1A0A0K0K1C0 115 aa11.72□□□□□ -0.53
SRRM1-216ENST00000489130 A8MUA0 341 aa11.72□□□□□ -0.53
SRRM1-216ENST00000489130 FCHO1O14526 889 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms