RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 C1RLQ9NZP8 487 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 RNF14Q9UBS8 474 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 WNT16Q9UBV4 365 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 LAMP3Q9UQV4 416 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 RUVBL2Q9Y230 463 aaKnown RBP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 RAP2CQ9Y3L5 183 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ATG4BQ9Y4P1 393 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.15□□□□□ -1.91
PRPF4-203ENST00000488937 GMEB1Q9Y692 573 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 KIF27Q86VH2 1401 aa3.15□□□□□ -1.91
PRPF4-203ENST00000488937 ARID2Q68CP9 1835 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 PTPRUQ92729 1446 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TRAV26-1A0A087WT03 109 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ARHGEF35A5YM69 484 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 EEF2KO00418 725 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CHEK1O14757 476 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ARPC1BO15143 372 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ARPC3O15145 178 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 LCMT2O60294 686 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 DNAJB6O75190 326 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 BCAS1O75363 584 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RPS6KA5O75582 802 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 C1QL1O75973 258 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 WISP2O76076 250 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 NDUFA7O95182 113 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 SYNGR4O95473 234 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 MBD3O95983 291 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RAF1P04049 648 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TMEM191BP0C7N4 346 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 STAG3L1P0CL83 205 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ERVK-10P10266 1014 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CD59P13987 128 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 IRF2P14316 349 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CPN1P15169 458 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 GNSP15586 552 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 U2AF2P26368 475 aaKnown RBP eCLIP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TACR3P29371 465 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 AXLP30530 894 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 DLSTP36957 453 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 GRIA3P42263 894 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 EPS15P42566 896 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 STARP49675 285 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CLCN4P51793 760 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 HNRNPH2P55795 449 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 P2RX3P56373 397 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 NLRP11P59045 1033 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TAS2R38P59533 333 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 HERV-K104P63124 156 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 MBTD1Q05BQ5 628 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CACNG1Q06432 222 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RASGEF1BQ0VAM2 473 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TRIP10Q15642 601 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 EFNB3Q15768 340 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RBBP7Q16576 425 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 SRSF7Q16629 238 aaKnown RBP eCLIP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CLPPQ16740 277 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 DCAF4L1Q3SXM0 396 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 UGT3A2Q3SY77 523 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF311Q5JNZ3 666 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 C10orf120Q5SQS8 335 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 PRAMEF5Q5TYX0 476 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 PRAMEF6Q5VXH4 476 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 FCRLBQ6BAA4 426 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 UGT3A1Q6NUS8 523 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 KCTD18Q6PI47 426 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TRIM65Q6PJ69 517 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 NAPRTQ6XQN6 538 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ZNF367Q7RTV3 350 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TRPM8Q7Z2W7 1104 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TRMT11Q7Z4G4 463 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 PATL1Q86TB9 770 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 PEG10Q86TG7 708 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 LONP2Q86WA8 852 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CHSY1Q86X52 802 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 UBE2J2Q8N2K1 259 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 SLC5A8Q8N695 610 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 OR5D13Q8NGL4 314 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 OR14A16Q8NHC5 309 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 THAP6Q8TBB0 222 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TRMT10AQ8TBZ6 339 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TSEN15Q8WW01 171 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 LPAR1Q92633 364 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 DPF1Q92782 380 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 P3H4Q92791 437 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RFT1Q96AA3 541 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RAB39BQ96DA2 213 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 MTERF3Q96E29 417 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 FAM71F1Q96KD3 344 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 IFT74Q96LB3 600 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 FAM20AQ96MK3 541 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 SIGLEC11Q96RL6 698 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 CHP1Q99653 195 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TIMP4Q99727 224 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 NPAS2Q99743 824 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 TUBA1CQ9BQE3 449 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 C11orf70Q9BRQ4 267 aa3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RIOK1Q9BRS2 568 aaKnown RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 ALKBH7Q9BT30 221 aaPredicted RBP3.14□□□□□ -1.91
PRPF4-203ENST00000488937 RBM24Q9BX46 236 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms