RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PAPD4Q6PIY7 484 aaKnown RBP14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 LINC00696Q6ZRV3 163 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 SCUBE1Q8IWY4 988 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 SIRT6Q8N6T7 355 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 OR52B6Q8NGF0 335 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 WDR20Q8TBZ3 569 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 M1APQ8TC57 530 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 CPT1CQ8TCG5 803 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 ACMSDQ8TDX5 336 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 KCNC2Q96PR1 638 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 TBCDQ9BTW9 1192 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 NTMT1Q9BV86 223 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 C1QTNF3Q9BXJ4 246 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 OR51B5Q9H339 312 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 SLAMF7Q9NQ25 335 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PRDM9Q9NQV7 894 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 DAPP1Q9UN19 280 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 PCDHGA11Q9Y5H2 935 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 CNTRLQ7Z7A1 2325 aa14.97□□□□□ -0.01
CTDSP1-209ENST00000488627 A0A088AWK7 358 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 A0A1B0GTL3 188 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 A0A1W2PPM1 405 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 A8MT66 165 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 FOXO6A8MYZ6 492 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 TGFBR3LH3BV60 316 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 GOLGA8RI6L899 631 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 RTCAO00442 366 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 PPP6CO00743 305 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 SH3BGRLO75368 114 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 SCELO95171 688 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 RPS17P08708 135 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 PYGBP11216 843 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 ZNF10P21506 573 aaPredicted RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 ATP5A1P25705 553 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 VSNL1P62760 191 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 ACTN3Q08043 901 aaPredicted RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 TRAF3Q13114 568 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 EXT1Q16394 746 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CPSF6Q16630 551 aaKnown RBP eCLIP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 BTBD16Q32M84 506 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 KHDRBS2Q5VWX1 349 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CHSY3Q70JA7 882 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 RPS27LQ71UM5 84 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 LCA5Q86VQ0 697 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 TDRPQ86YL5 185 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CYP4X1Q8N118 509 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 ACOT4Q8N9L9 421 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CATSPER1Q8NEC5 780 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 SRFBP1Q8NEF9 429 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 NFAM1Q8NET5 270 aaPredicted RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 DNAJB14Q8TBM8 379 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 UBLCP1Q8WVY7 318 aaPredicted RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 HAS2Q92819 552 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 DOCK10Q96BY6 2186 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CMTM7Q96FZ5 175 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CDK15Q96Q40 435 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 MTERF1Q99551 399 aaKnown RBP14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 LPAR4Q99677 370 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 CCDC77Q9BR77 488 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 EPS8L2Q9H6S3 715 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 MMP25Q9NPA2 562 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 DMRT3Q9NQL9 472 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 TBK1Q9UHD2 729 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 MMACHCQ9Y4U1 282 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 PCDHGA10Q9Y5H3 936 aa14.96□□□□□ -0.01
CTDSP1-209ENST00000488627 SAP18O00422 153 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 DLX3O60479 287 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 CLDN9O95484 217 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 HIST1H1TP22492 207 aaPredicted RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 NEK2P51955 445 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 SLC26A5P58743 744 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 RPS13P62277 151 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 AP2B1P63010 937 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 TGM3Q08188 693 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 RASA2Q15283 850 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 ZRSR2Q15696 482 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 MYLK4Q86YV6 388 aaPredicted RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF483Q8TF39 744 aaPredicted RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 SNRNP40Q96DI7 357 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 C19orf60Q96EN9 201 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 CSF3RQ99062 836 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 BARD1Q99728 777 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 NPAS2Q99743 824 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 MAPKAP1Q9BPZ7 522 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 SORBS1Q9BX66 1292 aaKnown RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 ZNF717Q9BY31 904 aaPredicted RBP14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 ROGDIQ9GZN7 287 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 LYRM4Q9HD34 91 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 PSD3Q9NYI0 1048 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 PLA2G3Q9NZ20 509 aa14.95□□□□□ -0.02
CTDSP1-209ENST00000488627 RELNP78509 3460 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 FOXE1O00358 373 aaPredicted RBP14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 ZIC2O95409 532 aaPredicted RBP14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 ETHE1O95571 254 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 WDPCPO95876 746 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 HSD17B3P37058 310 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 SLCO1A2P46721 670 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 CCNG1P51959 295 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 CDH13P55290 713 aa14.94□□□□□ -0.02
CTDSP1-209ENST00000488627 HSD17B7P56937 341 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms