RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 KCMF1Q9P0J7 381 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 TMEM216Q9P0N5 145 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 C19orf25Q9UFG5 118 aaPredicted RBP13.34□□□□□ -0.27
COL9A2-208ENST00000488463 RNF11Q9Y3C5 154 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 PCDHGA10Q9Y5H3 936 aa13.34□□□□□ -0.27
COL9A2-208ENST00000488463 TNPO3Q9Y5L0 923 aaKnown RBP13.34□□□□□ -0.27
COL9A2-208ENST00000488463 A0A1B0GTL3 188 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 TTLL8A6PVC2 850 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PRMT3O60678 531 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 JAK1P23458 1154 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 EEF1DP29692 281 aaKnown RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PIK3CBP42338 1070 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 LIM2P55344 173 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 TRAF3Q13114 568 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 INPP5JQ15735 1006 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 HIST2H2ACQ16777 129 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 DEPDC1Q5TB30 811 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 B3GNTL1Q67FW5 361 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 HIST2H2AA3Q6FI13 130 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 TRIM40Q6P9F5 258 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PAPD4Q6PIY7 484 aaKnown RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 LINC00696Q6ZRV3 163 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 ZADH2Q8N4Q0 377 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 SIRT6Q8N6T7 355 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 NFAM1Q8NET5 270 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 HUS1BQ8NHY5 278 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 WDR20Q8TBZ3 569 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 CPT1CQ8TCG5 803 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PTCHD1Q96NR3 888 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 CSF3RQ99062 836 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 ZNF717Q9BY31 904 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 DMRT3Q9NQL9 472 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PRDM9Q9NQV7 894 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PTGFRNQ9P2B2 879 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 PSMC3IPQ9P2W1 217 aaPredicted RBP13.33□□□□□ -0.28
COL9A2-208ENST00000488463 TMCO1Q9UM00 188 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 DAPP1Q9UN19 280 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 NTNG1Q9Y2I2 539 aa13.33□□□□□ -0.28
COL9A2-208ENST00000488463 CLEC18AA5D8T8 446 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 A8MT66 165 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 RTCAO00442 366 aaKnown RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 PPP6CO00743 305 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 B3GALT2O43825 422 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ETHE1O95571 254 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 TGFB1P01137 390 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ICAM2P13598 275 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ATP5A1P25705 553 aaKnown RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 SERPINB1P30740 379 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 MTTPP55157 894 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 RAB38P57729 211 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 SLC26A5P58743 744 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 VSNL1P62760 191 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 TMEM35AQ53FP2 167 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 LGSNQ5TDP6 509 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 IRAK1BP1Q5VVH5 260 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 KHDRBS2Q5VWX1 349 aaKnown RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 CLEC18BQ6UXF7 455 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 RPS27LQ71UM5 84 aaKnown RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 TDRPQ86YL5 185 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 CYP4X1Q8N118 509 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 CLEC18CQ8NCF0 446 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 M1APQ8TC57 530 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ACMSDQ8TDX5 336 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ZNF483Q8TF39 744 aaPredicted RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 TM9SF4Q92544 642 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 C19orf60Q96EN9 201 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 FAR2Q96K12 515 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 SCYL1Q96KG9 808 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 KCNC2Q96PR1 638 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 CDK15Q96Q40 435 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 TBCDQ9BTW9 1192 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 NTMT1Q9BV86 223 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 SORBS1Q9BX66 1292 aaKnown RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 OR51B5Q9H339 312 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 NOL11Q9H8H0 719 aaKnown RBP13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ACTR8Q9H981 624 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 MMP25Q9NPA2 562 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 ZNF225Q9UK10 706 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 MMACHCQ9Y4U1 282 aa13.32□□□□□ -0.28
COL9A2-208ENST00000488463 NBPF19A0A087WUL8 3843 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 IQANK1A0A1B0GTG1 560 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 A0A1W2PPM1 405 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 PLPP1O14494 284 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 MAN1A2O60476 641 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 SH3BGRLO75368 114 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 PCNAP12004 261 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 HIST1H1TP22492 207 aaPredicted RBP13.31□□□□□ -0.28
COL9A2-208ENST00000488463 HPDP32754 393 aaPredicted RBP13.31□□□□□ -0.28
COL9A2-208ENST00000488463 PIK3CGP48736 1102 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 GPR143P51810 404 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 HSD17B7P56937 341 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 OR4D2P58180 307 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 SRSF1Q07955 248 aaKnown RBP eCLIP13.31□□□□□ -0.287e-7■□□□□ 10.8
COL9A2-208ENST00000488463 RASA2Q15283 850 aa13.31□□□□□ -0.28
COL9A2-208ENST00000488463 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
COL9A2-208ENST00000488463 BTBD16Q32M84 506 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms