RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SERPINB3P29508 390 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 OTX2P32243 289 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 ABCE1P61221 599 aaKnown RBP14.88□□□□□ -0.03
C9orf3-219ENST00000488186 PPP2R2AP63151 447 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 SNRPNP63162 240 aaKnown RBP14.88□□□□□ -0.03
C9orf3-219ENST00000488186 CSTF3Q12996 717 aaKnown RBP14.88□□□□□ -0.03
C9orf3-219ENST00000488186 SSPNQ14714 243 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 TCHHL1Q5QJ38 904 aaPredicted RBP14.88□□□□□ -0.03
C9orf3-219ENST00000488186 SH2D4BQ5SQS7 431 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 ATG16L1Q676U5 607 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 CYP20A1Q6UW02 462 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 SCIMPQ6UWF3 145 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 PAGE2Q7Z2X7 111 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 CLYBLQ8N0X4 340 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 VPS50Q96JG6 964 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 QRFPRQ96P65 431 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 HBEGFQ99075 208 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 CRB3Q9BUF7 120 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 TGIF2Q9GZN2 237 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 PRDM7Q9NQW5 492 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 VPS29Q9UBQ0 182 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 C3orf18Q9UK00 162 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 TRAF6Q9Y4K3 522 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 SCN3AQ9NY46 2000 aa14.88□□□□□ -0.03
C9orf3-219ENST00000488186 CACNA1GO43497 2377 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 VSTM2BA6NLU5 285 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 KLF7O75840 302 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 SNUPNO95149 360 aaKnown RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 BMP10O95393 424 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 TBX6O95947 436 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 HIST1H1TP22492 207 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 JAK1P23458 1154 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 ATP5A1P25705 553 aaKnown RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 CERS1P27544 350 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 TSFMP43897 325 aaKnown RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 SLC1A6P48664 564 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 ARFIP1P53367 373 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 EMP2P54851 167 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 FOXA1P55317 472 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 WDR4P57081 412 aaKnown RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 KLC1Q07866 573 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 SLAMF1Q13291 335 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 ABRAXAS2Q15018 415 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 SPDYAQ5MJ70 313 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 FAM69BQ5VUD6 431 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 CLEC6AQ6EIG7 209 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 C19orf48Q6RUI8 117 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 UBE3DQ7Z6J8 389 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 ACOT4Q8N9L9 421 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 AGR3Q8TD06 166 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 METTL21AQ8WXB1 218 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 TBC1D20Q96BZ9 403 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 OR1F2PQ96R84 312 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 ILKAPQ9H0C8 392 aaPredicted RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 PFDN4Q9NQP4 134 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 SEMA3GQ9NS98 782 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 MKL2Q9ULH7 1088 aa14.87□□□□□ -0.03
C9orf3-219ENST00000488186 MRPS33Q9Y291 106 aaKnown RBP14.87□□□□□ -0.03
C9orf3-219ENST00000488186 ZFYVE26Q68DK2 2539 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 IGLV3-12A0A075B6K2 115 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 C4orf51C9J302 202 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 SLC28A1O00337 649 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 PEX12O00623 359 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 PLPP1O14494 284 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 B4GALT2O60909 372 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 CNOT3O75175 753 aaKnown RBP14.86□□□□□ -0.03
C9orf3-219ENST00000488186 SEMA3DO95025 777 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 ETHE1O95571 254 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 FHP07954 510 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 FGF4P08620 206 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 WT1P19544 449 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-219ENST00000488186 TLX1P31314 330 aaPredicted RBP14.86□□□□□ -0.03
C9orf3-219ENST00000488186 HTR6P50406 440 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 BTKQ06187 659 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 RUNX2Q13950 521 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 UGT8Q16880 541 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 NUDT13Q86X67 352 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 DDIASQ8IXT1 998 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 KIRREL3Q8IZU9 778 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 CA13Q8N1Q1 262 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 ADAMTS18Q8TE60 1221 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 SPSB2Q99619 263 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 SORBS1Q9BX66 1292 aaKnown RBP14.86□□□□□ -0.03
C9orf3-219ENST00000488186 RBCK1Q9BYM8 510 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 MANSC1Q9H8J5 431 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 FBXW2Q9UKT8 454 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 FER1L5A0AVI2 2057 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 NBEAQ8NFP9 2946 aa14.86□□□□□ -0.03
C9orf3-219ENST00000488186 IDSB3KWA1 339 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CLDN4O14493 209 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 DYNC1I1O14576 645 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 RGS14O43566 566 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 ITM2AO43736 263 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 DNAJB6O75190 326 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 LYPLA1O75608 230 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CDC123O75794 336 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 KLK1P06870 262 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CHN1P15882 459 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CPN2P22792 545 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms