RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZFYVE21Q9BQ24 234 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 TBCDQ9BTW9 1192 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 ABCG4Q9H172 646 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 DOLKQ9UPQ8 538 aa8.98□□□□□ -0.97
SF3B1-211ENST00000487698 SDC3O75056 442 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 UBXN7O94888 489 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 EPN2O95208 641 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ANXA6P08133 673 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 FAM58BPP0C7Q3 252 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 SLC35G6P0C7Q6 338 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 TYRP1P17643 537 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 SNRPNP63162 240 aaKnown RBP8.97□□□□□ -0.97
SF3B1-211ENST00000487698 HBA1P69905 142 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 RGS1Q08116 209 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF621Q6ZSS3 439 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 SERPINA11Q86U17 422 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 TMEM126BQ8IUX1 230 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 MICU2Q8IYU8 434 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ADGRG5Q8IZF4 528 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 KCT2Q8NC54 265 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 TNIP2Q8NFZ5 429 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 OR52E4Q8NGH9 312 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 OR4A15Q8NGL6 344 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 OR8K5Q8NH50 307 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ZFP90Q8TF47 636 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 CANT1Q8WVQ1 401 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 GAB3Q8WWW8 586 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 FAM120BQ96EK7 910 aaKnown RBP8.97□□□□□ -0.97
SF3B1-211ENST00000487698 REXO5Q96IC2 774 aaKnown RBP8.97□□□□□ -0.97
SF3B1-211ENST00000487698 TACO1Q9BSH4 297 aaKnown RBP8.97□□□□□ -0.97
SF3B1-211ENST00000487698 KLHL25Q9H0H3 589 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 CHST8Q9H2A9 424 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 GORASP2Q9H8Y8 452 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 TPT1P8Q9HAU6 139 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 SLAMF7Q9NQ25 335 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 CCM2LQ9NUG4 571 aaPredicted RBP8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ARMC1Q9NVT9 282 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 TAS2R7Q9NYW3 318 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 EHD3Q9NZN3 535 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ZNF282Q9UDV7 671 aaPredicted RBP8.97□□□□□ -0.97
SF3B1-211ENST00000487698 VPS4AQ9UN37 437 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 C15orf41Q9Y2V0 281 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 ASB4Q9Y574 426 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 AP4S1Q9Y587 144 aa8.97□□□□□ -0.97
SF3B1-211ENST00000487698 LOC105369274A0A096LPK9 316 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 LOC102723532A0A0G2JNH3 316 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 A0A0J9YVX5 310 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 A0A1B0GTW7 788 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 DHRS12A0PJE2 317 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 ELOVL7A1L3X0 281 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 EVPLLA8MZ36 301 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 NVLO15381 856 aaKnown RBP8.96□□□□□ -0.97
SF3B1-211ENST00000487698 LAMTOR5O43504 91 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 PRAMEF10O60809 474 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 C6orf47O95873 294 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 GPIP06744 558 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 ABCB1P08183 1280 aaPredicted RBP8.96□□□□□ -0.97
SF3B1-211ENST00000487698 GIMD1P0DJR0 217 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 SMIM10L1P0DMW3 83 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 DRD2P14416 443 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 ENGP17813 658 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 CERS1P27544 350 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 MVDP53602 400 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 RAB8AP61006 207 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 SRSF5Q13243 272 aaKnown RBP8.96□□□□□ -0.97
SF3B1-211ENST00000487698 TEAD4Q15561 434 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 C14orf28Q4W4Y0 310 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 MTX3Q5HYI7 312 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 WLSQ5T9L3 541 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 GLYATQ6IB77 296 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 FRMPD2BQ6IN97 320 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 KLHL35Q6PF15 583 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 C11orf74Q86VG3 221 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 OR4N4Q8N0Y3 316 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 NATD1Q8N6N6 113 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 TMEM102Q8N9M5 508 aaPredicted RBP8.96□□□□□ -0.97
SF3B1-211ENST00000487698 UTP15Q8TED0 518 aaKnown RBP8.96□□□□□ -0.97
SF3B1-211ENST00000487698 SMIM10Q96HG1 83 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.96□□□□□ -0.97
SF3B1-211ENST00000487698 SEMA6CQ9H3T2 930 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 TMEM74BQ9NUR3 256 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 TAS2R9Q9NYW1 312 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 SNX11Q9Y5W9 270 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 CSNK1G3Q9Y6M4 447 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 LAMA1P25391 3075 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 ASXL3Q9C0F0 2248 aa8.96□□□□□ -0.97
SF3B1-211ENST00000487698 PDPK1O15530 556 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 SH3BP5O60239 455 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 CAPNS1P04632 268 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 ZNF888P0CJ79 500 aaPredicted RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 DDX5P17844 614 aaKnown RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PPIBP23284 216 aaKnown RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PSMA4P25789 261 aaKnown RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PEX2P28328 305 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 SOX11P35716 441 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 DHPSP49366 369 aaPredicted RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 POLE2P56282 527 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 PCBP4P57723 403 aaKnown RBP8.96□□□□□ -0.98
SF3B1-211ENST00000487698 TGM3Q08188 693 aa8.96□□□□□ -0.98
SF3B1-211ENST00000487698 SLC9A5Q14940 896 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms