RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SLC19A2O60779 497 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 STX2P32856 288 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 MLF1P58340 268 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 DOC2AQ14183 400 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 HIST2H2ACQ16777 129 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-215ENST00000487563 KBTBD12Q3ZCT8 623 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 PAGE2BQ5JRK9 111 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 ZNF468Q5VIY5 522 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-215ENST00000487563 HIST2H2AA3Q6FI13 130 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-215ENST00000487563 NFAM1Q8NET5 270 aaPredicted RBP22.06■■□□□ 1.12
PLOD3-215ENST00000487563 B3GNT7Q8NFL0 401 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 KIAA1191Q96A73 305 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 GPR137Q96N19 417 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 NPIPA1Q9UND3 350 aa22.06■■□□□ 1.12
PLOD3-215ENST00000487563 ASPDHA6ND91 283 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 MAGEA4P43358 317 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 CLCN2P51788 898 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 MTTPP55157 894 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 HSD17B7P56937 341 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 IRF8Q02556 426 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 LAPTM5Q13571 262 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 RCN2Q14257 317 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 TERF2Q15554 542 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 KRTCAP3Q53RY4 240 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 SYT10Q6XYQ8 523 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 LRRC70Q7Z2Q7 622 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 TBC1D1Q86TI0 1168 aaPredicted RBP22.05■■□□□ 1.12
PLOD3-215ENST00000487563 SCUBE1Q8IWY4 988 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 FBXO25Q8TCJ0 367 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 THAP3Q8WTV1 239 aaPredicted RBP22.05■■□□□ 1.12
PLOD3-215ENST00000487563 CCDC120Q96HB5 630 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 UBXN10Q96LJ8 280 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 QRFPRQ96P65 431 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 SERINC2Q96SA4 455 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 ALG9Q9H6U8 611 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 PTBP2Q9UKA9 531 aaKnown RBP22.05■■□□□ 1.12
PLOD3-215ENST00000487563 FBXW2Q9UKT8 454 aa22.05■■□□□ 1.12
PLOD3-215ENST00000487563 ARHGAP10A1A4S6 786 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 SUPT3HB4E1H0 165 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 NME2P1O60361 137 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 SUPT3HO75486 399 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 FAM155BO75949 473 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 TFEBP19484 476 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 NME2P22392 152 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 CERS1P27544 350 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 HLCSP50747 726 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 ETF1P62495 437 aaKnown RBP22.04■■□□□ 1.12
PLOD3-215ENST00000487563 CHIT1Q13231 466 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 ADPRMQ3LIE5 342 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 ADNP2Q6IQ32 1131 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 VN1R5Q7Z5H4 357 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 CMC1Q7Z7K0 106 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 ZNF595Q8IYB9 648 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 C17orf53Q8N3J3 647 aaPredicted RBP22.04■■□□□ 1.12
PLOD3-215ENST00000487563 STAG3L4Q8TBR4 150 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 FBF1Q8TES7 1133 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 VMP1Q96GC9 406 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 CCDC77Q9BR77 488 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 NMRAL1Q9HBL8 299 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 NUDT4Q9NZJ9 180 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 ENTPD4Q9Y227 616 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 CACNA1DQ01668 2161 aa22.04■■□□□ 1.12
PLOD3-215ENST00000487563 CENPEQ02224 2701 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 MYO7BQ6PIF6 2116 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 HNRNPRO43390 633 aaKnown RBP22.03■■□□□ 1.12
PLOD3-215ENST00000487563 PRAMEF4O60810 478 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 WISP2O76076 250 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 C1QAP02745 245 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 ESRRAP11474 423 aaPredicted RBP22.03■■□□□ 1.12
PLOD3-215ENST00000487563 ZNF24P17028 368 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 NAB1Q13506 487 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 PRAMEF9Q5VWM5 478 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 ABHD17CQ6PCB6 329 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 RPTNQ6XPR3 784 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 CLNKQ7Z7G1 428 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 MRGPRGQ86SM5 289 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 APCDD1LQ8NCL9 501 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 ITLN2Q8WWU7 325 aaPredicted RBP22.03■■□□□ 1.12
PLOD3-215ENST00000487563 WDR34Q96EX3 536 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 F2RL3Q96RI0 385 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 CD244Q9BZW8 370 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 ADAP2Q9NPF8 381 aa22.03■■□□□ 1.12
PLOD3-215ENST00000487563 ZNF490Q9ULM2 529 aaPredicted RBP22.03■■□□□ 1.12
PLOD3-215ENST00000487563 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.03■■□□□ 1.12
PLOD3-215ENST00000487563 SYNDIG1LA6NDD5 238 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 IFNA16P05015 189 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 SLC35E2BP0CK96 405 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 CRABP2P29373 138 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 PPP2R1BP30154 601 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 TRHRP34981 398 aaPredicted RBP22.02■■□□□ 1.12
PLOD3-215ENST00000487563 GMPRP36959 345 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 MSH2P43246 934 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 KCNC1P48547 511 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 HNRNPFP52597 415 aaKnown RBP22.02■■□□□ 1.12
PLOD3-215ENST00000487563 LIM2P55344 173 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 C3AR1Q16581 482 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 ZNF808Q8N4W9 903 aaPredicted RBP22.02■■□□□ 1.12
PLOD3-215ENST00000487563 TMEM156Q8N614 296 aa22.02■■□□□ 1.12
PLOD3-215ENST00000487563 TMEM52Q8NDY8 209 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms