RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CCT6BQ92526 530 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ESAMQ96AP7 390 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 TMEM125Q96AQ2 219 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 DERL2Q9GZP9 239 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 CAB39LQ9H9S4 337 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 POPDC3Q9HBV1 291 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 PRTFDC1Q9NRG1 225 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 FBXW2Q9UKT8 454 aa11.38□□□□□ -0.59
VPS16-208ENST00000487461 ZNF490Q9ULM2 529 aaPredicted RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 PPIEQ9UNP9 301 aaKnown RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 NCOA6Q14686 2063 aaPredicted RBP11.38□□□□□ -0.59
VPS16-208ENST00000487461 MYOCOSA0A1B0GUC4 107 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 CCDC188H7C350 402 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 CLDN4O14493 209 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 FCHO1O14526 889 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 B3GALT2O43825 422 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 PEX1O43933 1283 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 PRKNO60260 465 aaPredicted RBP11.37□□□□□ -0.59
VPS16-208ENST00000487461 CLEC3AO75596 197 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 CLDN14O95500 239 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 CCDC166P0CW27 439 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 SSTR1P30872 391 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 GGT5P36269 586 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 RFC3P40938 356 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 PLA2G16P53816 162 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 HSD17B7P56937 341 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 RAB38P57729 211 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 POU4F1Q01851 419 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 TERF2Q15554 542 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 ADPRMQ3LIE5 342 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 ADNP2Q6IQ32 1131 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 ABHD17CQ6PCB6 329 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 C16orf47Q6ZP98 133 aaPredicted RBP11.37□□□□□ -0.59
VPS16-208ENST00000487461 MDGA2Q7Z553 956 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 GPSM1Q86YR5 675 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 KRT78Q8N1N4 520 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 POGLUT1Q8NBL1 392 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 PYROXD1Q8WU10 500 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 NCLNQ969V3 563 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 MTFMTQ96DP5 389 aaKnown RBP11.37□□□□□ -0.59
VPS16-208ENST00000487461 DMRTA2Q96SC8 542 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 KRT12Q99456 494 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 NAPGQ99747 312 aaPredicted RBP11.37□□□□□ -0.59
VPS16-208ENST00000487461 CAPS2Q9BXY5 557 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 TRIM8Q9BZR9 551 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 LIN28AQ9H9Z2 209 aaKnown RBP11.37□□□□□ -0.59
VPS16-208ENST00000487461 GRPEL1Q9HAV7 217 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 NSMCE4AQ9NXX6 385 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 GPRC5BQ9NZH0 403 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
VPS16-208ENST00000487461 HRH3Q9Y5N1 445 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 FBN2P35556 2912 aa11.37□□□□□ -0.59
VPS16-208ENST00000487461 A0A1B0GTH9 108 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 ANKDD1BA6NHY2 528 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 TMEM200CA6NKL6 621 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 E9PLN8 166 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 KLRC4-KLRK1H3BQV0 150 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 CYR61O00622 381 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PRRG2O14669 202 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 CLGNO14967 610 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PHGDHO43175 533 aaKnown RBP11.36□□□□□ -0.59
VPS16-208ENST00000487461 HS6ST1O60243 411 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 ITGA10O75578 1167 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 CD1DP15813 335 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 POU3F2P20265 443 aaPredicted RBP11.36□□□□□ -0.59
VPS16-208ENST00000487461 CD22P20273 847 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 CERS1P27544 350 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 GSTM2P28161 218 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PAFAH1B1P43034 410 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 KCNC1P48547 511 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 HSPA7P48741 367 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 SLC12A2P55011 1212 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 LIM2P55344 173 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 OR4D1Q15615 310 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 XKR6Q5GH73 641 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 GDF7Q7Z4P5 450 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 CLNKQ7Z7G1 428 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 ZNF595Q8IYB9 648 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 TMEM156Q8N614 296 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 FAM47BQ8NA70 645 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 OR2L5Q8NG80 312 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 C16orf52Q8NHV5 167 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PHF10Q8WUB8 498 aaKnown RBP11.36□□□□□ -0.59
VPS16-208ENST00000487461 VMP1Q96GC9 406 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 SEC16BQ96JE7 1060 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 LURAP1Q96LR2 239 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 F2RL3Q96RI0 385 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 SERINC2Q96SA4 455 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 CSF3RQ99062 836 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 VKORC1Q9BQB6 163 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PITHD1Q9GZP4 211 aaPredicted RBP11.36□□□□□ -0.59
VPS16-208ENST00000487461 REXO4Q9GZR2 422 aaKnown RBP11.36□□□□□ -0.59
VPS16-208ENST00000487461 EHD1Q9H4M9 534 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PRDM7Q9NQW5 492 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 DNAJC11Q9NVH1 559 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 WWOXQ9NZC7 414 aa11.36□□□□□ -0.59
VPS16-208ENST00000487461 PTBP2Q9UKA9 531 aaKnown RBP11.36□□□□□ -0.59
VPS16-208ENST00000487461 PDZD2O15018 2839 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms