RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CHD5Q8TDI0 1954 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 DICER1Q9UPY3 1922 aaKnown RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 FNDC1Q4ZHG4 1894 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 TRBC2A0A5B9 178 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF840PA6NDX5 716 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 TLX2O43763 284 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 ALPPL2P10696 532 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CTGFP29279 349 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 MBTPS1Q14703 1052 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CDK10Q15131 360 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 NDUFA5Q16718 116 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 SLC5A12Q1EHB4 618 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CACUL1Q86Y37 369 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 ATP6V1C2Q8NEY4 427 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 MTERF3Q96E29 417 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 OPALINQ96PE5 141 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 OR2B2Q9GZK3 357 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 CDCP1Q9H5V8 836 aa11.87□□□□□ -0.51
HSPG2-211ENST00000486901 NMNAT1Q9HAN9 279 aaPredicted RBP11.87□□□□□ -0.51
HSPG2-211ENST00000486901 A0A0B4J293 547 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 C12orf71A8MTZ7 269 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 CH25HO95992 272 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
HSPG2-211ENST00000486901 CDC42P60953 191 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 MGAT3Q09327 533 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 RNF31Q96EP0 1072 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
HSPG2-211ENST00000486901 BRD9Q9H8M2 597 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 CCDC177Q9NQR7 707 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-211ENST00000486901 MAT2BQ9NZL9 334 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 A0A0X1KG70 313 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-211ENST00000486901 LHCGRP22888 699 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 SDC2P34741 201 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 SPAM1P38567 509 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 SELENOWP63302 87 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 CRHR2Q13324 411 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 MORN1Q5T089 497 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 CERS6Q6ZMG9 384 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-211ENST00000486901 GATAD2BQ8WXI9 593 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 GABARAPL1Q9H0R8 117 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 ABCG4Q9H172 646 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 MKLN1Q9UL63 735 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 SNX11Q9Y5W9 270 aa11.86□□□□□ -0.51
HSPG2-211ENST00000486901 SPIN1Q9Y657 262 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-211ENST00000486901 LOC102723532A0A0G2JNH3 316 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 EIF3FO00303 357 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CYP2A7P20853 494 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 MYL9P24844 172 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CCND3P30281 292 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 MAN2A2P49641 1150 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 RNF144AP50876 292 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ARPC4P59998 168 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 MLLT1Q03111 559 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 GPR50Q13585 617 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 E2F2Q14209 437 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 C5orf22Q49AR2 442 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 IFI44LQ53G44 452 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 FUT10Q6P4F1 479 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 USP30Q70CQ3 517 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 SYNPOQ8N3V7 929 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 YIPF7Q8N8F6 280 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 HUS1BQ8NHY5 278 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 WDR48Q8TAF3 677 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ENKURQ8TC29 256 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 PITX2Q99697 317 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 SH2B3Q9UQQ2 575 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CFL2Q9Y281 166 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 HSPB11Q9Y547 144 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 MAU2Q9Y6X3 613 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ANKDD1BA6NHY2 528 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 UNCXA6NJT0 531 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CSO75390 466 aaKnown RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 SLC16A8O95907 504 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 HBQ1P09105 142 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 PDHA2P29803 388 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 UGT2B10P36537 528 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CD79BP40259 229 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 LRRC32Q14392 662 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 MICAQ29983 383 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CLEC12AQ5QGZ9 265 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 ATAT1Q5SQI0 421 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 PRR23CQ6ZRP0 262 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 THOC6Q86W42 341 aaKnown RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 OR7G1Q8NGA0 311 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 JPH3Q8WXH2 748 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 UPF1Q92900 1129 aaKnown RBP eCLIP11.85□□□□□ -0.511e-9■■■■□ 25.6
HSPG2-211ENST00000486901 YIPF4Q9BSR8 244 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 RACGAP1Q9H0H5 632 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CLN6Q9NWW5 311 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 KCTD5Q9NXV2 234 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 HSPE1-MOB4S4R3N1 261 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 TDRD15B5MCY1 1934 aaKnown RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 HOXB9P17482 250 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-211ENST00000486901 CD70P32970 193 aa11.85□□□□□ -0.51
HSPG2-211ENST00000486901 GPC1P35052 558 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms