RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CSNK2BP67870 215 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 ARHGAP19Q14CB8 494 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 TMC5Q6UXY8 1006 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 Q6ZNX1 250 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 PRSS48Q7RTY5 328 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 HEATR4Q86WZ0 1026 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 OR10G2Q8NGC3 310 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 TRUB1Q8WWH5 349 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 SMARCD2Q92925 531 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 UBE2FQ969M7 185 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 PLEKHA8Q96JA3 519 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 FEVQ99581 238 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 ACAT2Q9BWD1 397 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 SORBS1Q9BX66 1292 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC6A16Q9GZN6 736 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 PELI2Q9HAT8 420 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 PALMDQ9NP74 551 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 MIEF1Q9NQG6 463 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 AHSPQ9NZD4 102 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 TAAR2Q9P1P5 351 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC23A2Q9UGH3 650 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 ZNF451Q9Y4E5 1061 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 IL12RB1P42701 662 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 OR1E2P47887 323 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 PCBP3P57721 371 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SPIBQ01892 262 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 CNTN1Q12860 1018 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 CLCA4Q14CN2 919 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 GPR153Q6NV75 609 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 PNCKQ6P2M8 343 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 CCDC81Q6ZN84 652 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 ZBTB46Q86UZ6 589 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 LRRTM4Q86VH4 590 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 C17orf64Q86WR6 236 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 MMP21Q8N119 569 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 KCNC2Q96PR1 638 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SIGLEC11Q96RL6 698 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 TMEM121BQ9BXQ6 578 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 RHBGQ9H310 441 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 EPS8L2Q9H6S3 715 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 ACOT13Q9NPJ3 140 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 RNF6Q9Y252 685 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 PRAMEF25A6NGN4 478 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 PLPP1O14494 284 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC22A1O15245 554 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SEMA3DO95025 777 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 FADS2O95864 444 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 CA3P07451 260 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 ANXA8P13928 327 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 UQCRC2P22695 453 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 GGT2P36268 569 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 MICAQ29983 383 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC30A8Q8IWU4 369 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 PARP8Q8N3A8 854 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC5A8Q8N695 610 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC15A4Q8N697 577 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 ABHD11Q8NFV4 315 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 OR5K2Q8NHB8 316 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 GEMIN6Q8WXD5 167 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 PRSS16Q9NQE7 514 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 NECTIN3Q9NQS3 549 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 TAC3Q9UHF0 121 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 ANGPT4Q9Y264 503 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 DGKBQ9Y6T7 804 aa17.17■□□□□ 0.34
PDLIM7-207ENST00000486828 TBC1D3BA6NDS4 549 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 ANKDD1BA6NHY2 528 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 A8MVJ9 347 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 TBX6O95947 436 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 RPN2P04844 631 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 PCCBP05166 539 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 HSD17B2P37059 387 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 CDH12P55289 794 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 CDK3Q00526 305 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 PIP5KL1Q5T9C9 394 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 DEPDC1Q5TB30 811 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 KHDRBS2Q5VWX1 349 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 ADGRD2Q7Z7M1 963 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 ERLEC1Q96DZ1 483 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 AIF1LQ9BQI0 150 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 ZNF717Q9BY31 904 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 NLNQ9BYT8 704 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 WASH6PQ9NQA3 447 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 POFUT2Q9Y2G5 429 aa17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 KIF26AQ9ULI4 1882 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-207ENST00000486828 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 MAGEB3O15480 346 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ZBTB11O95625 1053 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 EPHX1P07099 455 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 DDCP20711 480 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 CXCR2P25025 360 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PSMB9P28065 219 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PBX2P40425 430 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 ST13P50502 369 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 DSTNP60981 165 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 PDGFRLQ15198 375 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 EXOC3L2Q2M3D2 409 aa17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 Q6ZPB1 254 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-207ENST00000486828 P2RY8Q86VZ1 359 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms