RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 HNRNPFP52597 415 aaKnown RBP13.94□□□□□ -0.18
U2AF1-211ENST00000486519 FAM27E3Q08E93 113 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 TSTD2Q5T7W7 516 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 THEMIS2Q5TEJ8 643 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 PRAMEF20Q5VT98 475 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 CAPN13Q6MZZ7 669 aaPredicted RBP13.94□□□□□ -0.18
U2AF1-211ENST00000486519 TMEM52Q8NDY8 209 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 OR52K1Q8NGK4 314 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 ACTL9Q8TC94 416 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 HSPBAP1Q96EW2 488 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 SPTLC3Q9NUV7 552 aa13.94□□□□□ -0.18
U2AF1-211ENST00000486519 ZNHIT6Q9NWK9 470 aaKnown RBP13.94□□□□□ -0.18
U2AF1-211ENST00000486519 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
U2AF1-211ENST00000486519 F8W8V4 182 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 IL18BPO95998 194 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 PLAUP00749 431 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 CRYGSP22914 178 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 CCKARP32238 428 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 MEF2AQ02078 507 aaPredicted RBP13.93□□□□□ -0.18
U2AF1-211ENST00000486519 ACVR1Q04771 509 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 KLHL38Q2WGJ6 581 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 FASTKD1Q53R41 847 aaKnown RBP13.93□□□□□ -0.18
U2AF1-211ENST00000486519 HECTD2Q5U5R9 776 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 BBS12Q6ZW61 710 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 PLEKHM3Q6ZWE6 761 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 LRRC25Q8N386 305 aaPredicted RBP13.93□□□□□ -0.18
U2AF1-211ENST00000486519 RASGEF1CQ8N431 466 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 GOLM1Q8NBJ4 401 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 ANKRD9Q96BM1 317 aaPredicted RBP13.93□□□□□ -0.18
U2AF1-211ENST00000486519 EBNA1BP2Q99848 306 aaKnown RBP13.93□□□□□ -0.18
U2AF1-211ENST00000486519 PRDM14Q9GZV8 571 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 LRTM1Q9HBL6 345 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 ACKR4Q9NPB9 350 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 CAMK2AQ9UQM7 478 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 SLC6A5Q9Y345 797 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 PRR14LQ5THK1 2151 aa13.93□□□□□ -0.18
U2AF1-211ENST00000486519 TENM1Q9UKZ4 2725 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 CD8B2A6NJW9 211 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 ERN1O75460 977 aaKnown RBP13.92□□□□□ -0.18
U2AF1-211ENST00000486519 SYF2O95926 243 aaKnown RBP13.92□□□□□ -0.18
U2AF1-211ENST00000486519 P04436 131 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 ALOX12P18054 663 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 IMPA1P29218 277 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 MC3RP41968 323 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 GRIA1P42261 906 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 EIF3BP55884 814 aaKnown RBP13.92□□□□□ -0.18
U2AF1-211ENST00000486519 HERC3Q15034 1050 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 C6orf52Q5T4I8 152 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 MEI1Q5TIA1 1274 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 ZNF550Q7Z398 422 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 ARIH2OSQ8N7S6 290 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 BIRC8Q96P09 236 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 PANX3Q96QZ0 392 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 SLC30A3Q99726 388 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 CCDC77Q9BR77 488 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 SAMD15Q9P1V8 674 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 CDC42EP3Q9UKI2 254 aa13.92□□□□□ -0.18
U2AF1-211ENST00000486519 APOC4-APOC2K7ER74 178 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 NDUFS4O43181 175 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 CEP104O60308 925 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 APOC2P02655 101 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 TMEM253P0C7T8 217 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 RBP3P10745 1247 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 CPOXP36551 454 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 EIF3EP60228 445 aaKnown RBP13.91□□□□□ -0.18
U2AF1-211ENST00000486519 SCUBE1Q8IWY4 988 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 LIX1Q8N485 282 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 MFSD9Q8NBP5 474 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 SLC22A8Q8TCC7 542 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 TMEM171Q8WVE6 324 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 THAP11Q96EK4 314 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 ZC3HAV1LQ96H79 300 aaKnown RBP13.91□□□□□ -0.18
U2AF1-211ENST00000486519 WDYHV1Q96HA8 205 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 JSRP1Q96MG2 331 aaPredicted RBP13.91□□□□□ -0.18
U2AF1-211ENST00000486519 TTC1Q99614 292 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 FERMT1Q9BQL6 677 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 AICDAQ9GZX7 198 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 ZFP64Q9NPA5 681 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 HOMER3Q9NSC5 361 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 NDRG3Q9UGV2 375 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 LCMT1Q9UIC8 334 aa13.91□□□□□ -0.18
U2AF1-211ENST00000486519 MACROD2A1Z1Q3 448 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 A8MXE2 369 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 F7P08709 466 aaPredicted RBP13.9□□□□□ -0.18
U2AF1-211ENST00000486519 SLC35G6P0C7Q6 338 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 EGR1P18146 543 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 CTNNA2P26232 953 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 CFPP27918 469 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 ACVR1BP36896 505 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 HNF4AP41235 474 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 RAB8AP61006 207 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 TBPL1P62380 186 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 TERF2Q15554 542 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 DARS2Q6PI48 645 aaKnown RBP13.9□□□□□ -0.18
U2AF1-211ENST00000486519 LYPD8Q6UX82 237 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 IL17RELQ6ZVW7 336 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 GCNT2Q8N0V5 402 aa13.9□□□□□ -0.18
U2AF1-211ENST00000486519 CA13Q8N1Q1 262 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms