RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 UBE3DQ7Z6J8 389 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 TMEM52Q8NDY8 209 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 OR7G3Q8NG95 312 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 OR1N1Q8NGS0 311 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 SSC4DQ8WTU2 575 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 UBE2E3Q969T4 207 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 MAGEB10Q96LZ2 347 aaPredicted RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 SERINC2Q96SA4 455 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 NPAS2Q99743 824 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 MS4A8Q9BY19 250 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 KCNK13Q9HB14 408 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 STMN3Q9NZ72 180 aa18.34■□□□□ 0.53
SNX5-213ENST00000486039 CPSF2Q9P2I0 782 aaKnown RBP18.34■□□□□ 0.53
SNX5-213ENST00000486039 A0A088AWK7 358 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 EXOC1LA0A1B0GW35 172 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 RIPK2O43353 540 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 SIX3O95343 332 aaPredicted RBP18.33■□□□□ 0.52
SNX5-213ENST00000486039 PCNAP12004 261 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 ZNF10P21506 573 aaPredicted RBP18.33■□□□□ 0.52
SNX5-213ENST00000486039 HNRNPFP52597 415 aaKnown RBP18.33■□□□□ 0.52
SNX5-213ENST00000486039 MTTPP55157 894 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 LIM2P55344 173 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 ZNF33BQ06732 778 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 NR6A1Q15406 480 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 ABHD17BQ5VST6 288 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 FCRLBQ6BAA4 426 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 TRMT10CQ7L0Y3 403 aaKnown RBP18.33■□□□□ 0.52
SNX5-213ENST00000486039 SCUBE1Q8IWY4 988 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 RNF175Q8N4F7 328 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 TXLNGYQ9BZA5 131 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 RNF32Q9H0A6 362 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 XPR1Q9UBH6 696 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 DAPP1Q9UN19 280 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 ANGPTL3Q9Y5C1 460 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 CLDN16Q9Y5I7 305 aa18.33■□□□□ 0.52
SNX5-213ENST00000486039 PRRC2CQ9Y520 2896 aaKnown RBP18.33■□□□□ 0.52
SNX5-213ENST00000486039 ESPL1Q14674 2120 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 TGFBR3LH3BV60 316 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 E2F3O00716 465 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 MAN1A2O60476 641 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 SH3BGRLO75368 114 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 CBX6O95503 412 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 TGFB1P01137 390 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 SNRPAP09012 282 aaKnown RBP18.32■□□□□ 0.52
SNX5-213ENST00000486039 RBP1P09455 135 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 COL6A2P12110 1019 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 GTF2H2Q13888 395 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 C4orf17Q53FE4 359 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 RPUSD3Q6P087 351 aaKnown RBP18.32■□□□□ 0.52
SNX5-213ENST00000486039 GTF2H2CQ6P1K8 395 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 ZNF793Q6ZN11 406 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 GOLGA7Q7Z5G4 137 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 CYP4X1Q8N118 509 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 PTGR2Q8N8N7 351 aaPredicted RBP18.32■□□□□ 0.52
SNX5-213ENST00000486039 FAM47BQ8NA70 645 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 ELP5Q8TE02 316 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 ZNF354BQ96LW1 612 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 CSF3RQ99062 836 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 PRTFDC1Q9NRG1 225 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 PLEKHB1Q9UF11 243 aaPredicted RBP18.32■□□□□ 0.52
SNX5-213ENST00000486039 TEKT2Q9UIF3 430 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 MMACHCQ9Y4U1 282 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 TNPO3Q9Y5L0 923 aaKnown RBP18.32■□□□□ 0.52
SNX5-213ENST00000486039 SCN2AQ99250 2005 aa18.32■□□□□ 0.52
SNX5-213ENST00000486039 CPAMD8Q8IZJ3 1885 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 TRAV17A0A0B4J275 112 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 SAGE2PA6NJ88 616 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 A8MUA0 341 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 RTCAO00442 366 aaKnown RBP18.31■□□□□ 0.52
SNX5-213ENST00000486039 CYR61O00622 381 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 TGM3Q08188 693 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 TSNAXIP1Q2TAA8 658 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 ACER2Q5QJU3 275 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 LIPJQ5W064 366 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 ADGRD1Q6QNK2 874 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 CRLF3Q8IUI8 442 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 GSPT2Q8IYD1 628 aaKnown RBP18.31■□□□□ 0.52
SNX5-213ENST00000486039 BEST3Q8N1M1 668 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 KIF2BQ8N4N8 673 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 SRFBP1Q8NEF9 429 aaKnown RBP18.31■□□□□ 0.52
SNX5-213ENST00000486039 NFAM1Q8NET5 270 aaPredicted RBP18.31■□□□□ 0.52
SNX5-213ENST00000486039 HUS1BQ8NHY5 278 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 PRR7Q8TB68 274 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 GRHL3Q8TE85 626 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 PHF21BQ96EK2 531 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 SCYL1Q96KG9 808 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 KCNC2Q96PR1 638 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.31■□□□□ 0.52
SNX5-213ENST00000486039 EPB41L4BQ9H329 900 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 OR51B5Q9H339 312 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 IPPKQ9H8X2 491 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 ACTR8Q9H981 624 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 COPS7BQ9H9Q2 264 aaPredicted RBP18.31■□□□□ 0.52
SNX5-213ENST00000486039 KCMF1Q9P0J7 381 aa18.31■□□□□ 0.52
SNX5-213ENST00000486039 SPTAN1Q13813 2472 aaKnown RBP18.31■□□□□ 0.52
SNX5-213ENST00000486039 NBPF19A0A087WUL8 3843 aa18.3■□□□□ 0.52
SNX5-213ENST00000486039 OR5H15A6NDH6 313 aa18.3■□□□□ 0.52
SNX5-213ENST00000486039 SBK3P0C264 359 aa18.3■□□□□ 0.52
SNX5-213ENST00000486039 ATP5A1P25705 553 aaKnown RBP18.3■□□□□ 0.52
SNX5-213ENST00000486039 EEF1DP29692 281 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms