RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 NCF1CA8MVU1 366 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 IDSB3KWA1 339 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 H0YIV9 168 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 STX16-NPEPL1H3BU86 382 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 I3L1I5 382 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 K7EPI3 171 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 STX16O14662 325 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 UGDHO60701 494 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 KATNA1O75449 491 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 KRT38O76015 456 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 SIX3O95343 332 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 SNRPAP09012 282 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 NUDT17P0C025 328 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 COX6A1P12074 109 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 NCF1P14598 390 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 CREB1P16220 341 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ALOX12P18054 663 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 IL1RNP18510 177 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 SAT1P21673 171 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 CXCR2P25025 360 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 COL8A1P27658 744 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TYK2P29597 1187 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 GRK3P35626 688 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 FOLR3P41439 243 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 HSPA7P48741 367 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 SERPINB8P50452 374 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ST13P50502 369 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 GPR143P51810 404 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ALDH18A1P54886 795 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 SLC12A2P55011 1212 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 OLR1P78380 273 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TAGLNQ01995 201 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 RHAGQ02094 409 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 DOC2AQ14183 400 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MYBPC3Q14896 1274 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 HERC3Q15034 1050 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 NDUFA9Q16795 377 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 VWA2Q5GFL6 755 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 THEMIS2Q5TEJ8 643 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MLIPQ5VWP3 458 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TMIGD1Q6UXZ0 262 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ZNF793Q6ZN11 406 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 LANCL3Q6ZV70 420 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TBC1D1Q86TI0 1168 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 RAB43Q86YS6 212 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MREGQ8N565 214 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TTLQ8NG68 377 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 OR9A4Q8NGU2 314 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 OR2W6PQ8NHA6 318 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ACMSDQ8TDX5 336 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 AENQ8WTP8 325 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 ZNF473Q8WTR7 871 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 N4BP2L2Q92802 583 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 UCN3Q969E3 161 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 RERGQ96A58 199 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 C8orf44Q96CB5 159 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MS4A6EQ96DS6 147 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MTBPQ96DY7 904 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 PTCD3Q96EY7 689 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 CSF3RQ99062 836 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 AIF1LQ9BQI0 150 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 EFCAB11Q9BUY7 163 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 NPLQ9BXD5 320 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 ZNF700Q9H0M5 742 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 PPCSQ9HAB8 311 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 PRDM7Q9NQW5 492 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 DNAJC11Q9NVH1 559 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 KCMF1Q9P0J7 381 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 TP53TG5Q9Y2B4 290 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MAN2B2Q9Y2E5 1009 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 PTRH2Q9Y3E5 179 aaKnown RBP5.39□□□□□ -1.55
CUX1-208ENST00000485792 HCFC1P51610 2035 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 HEATR5AQ86XA9 2040 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 ADGRG4Q8IZF6 3080 aa5.39□□□□□ -1.55
CUX1-208ENST00000485792 MED12LQ86YW9 2145 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 INTS1Q8N201 2190 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 CENPEQ02224 2701 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 IGHV1-45A0A0A0MS14 117 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 A0A0G2JN53 185 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TMEM238LA0A1B0GVL6 79 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 A0A1W2PPM1 405 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 CLEC18AA5D8T8 446 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 SYCE1LA8MT33 242 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 TRIM49D1C9J1S8 452 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 CYR61O00622 381 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 OR7A17O14581 309 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 MSTNO14793 375 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 PRPF4O43172 522 aaKnown RBP eCLIP5.38□□□□□ -1.55
CUX1-208ENST00000485792 OR1F1O43749 312 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 RDH16O75452 317 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 PRKRAO75569 313 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 SORBS2O94875 1100 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 WDR47O94967 919 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 HPP00738 406 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 EIF2S1P05198 315 aaKnown RBP5.38□□□□□ -1.55
CUX1-208ENST00000485792 GSTA1P08263 222 aa5.38□□□□□ -1.55
CUX1-208ENST00000485792 INHBAP08476 426 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms