RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RPS13P62277 151 aaKnown RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 PPP2R2AP63151 447 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 CHI3L2Q15782 390 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 ADPRMQ3LIE5 342 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 TUBB8Q3ZCM7 444 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 SPIN4Q56A73 249 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 ARL13AQ5H913 290 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 SPDYAQ5MJ70 313 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 MFSD4BQ5TF39 518 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 IRAK1BP1Q5VVH5 260 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 LETMD1Q6P1Q0 360 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 ABHD17CQ6PCB6 329 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 FAM199XQ6PEV8 388 aaPredicted RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 PRICKLE2Q7Z3G6 844 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 PARP9Q8IXQ6 854 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 STT3BQ8TCJ2 826 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 AGAP11Q8TF27 550 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 STARD8Q92502 1023 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 TBC1D20Q96BZ9 403 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 MTFMTQ96DP5 389 aaKnown RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 FER1L6-AS2Q96M78 137 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 F2RL3Q96RI0 385 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 MACROD1Q9BQ69 325 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 CRB3Q9BUF7 120 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 SPNS1Q9H2V7 528 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 CLMPQ9H6B4 373 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 RIC8BQ9NVN3 520 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 THAP1Q9NVV9 213 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 LYARQ9NX58 379 aaKnown RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 PSME2Q9UL46 239 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 WBP11Q9Y2W2 641 aaKnown RBP7.83□□□□□ -1.16
SF3A1-208ENST00000485618 TRAF6Q9Y4K3 522 aa7.83□□□□□ -1.16
SF3A1-208ENST00000485618 IGLV3-12A0A075B6K2 115 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SERTM1A2A2V5 107 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 VSTM2BA6NLU5 285 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 K7ENP7 123 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 CHST10O43529 356 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 FOXS1O43638 330 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 DYRK3O43781 588 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 PRMT3O60678 531 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 PRAMEF4O60810 478 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 VPS4BO75351 444 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 RDH16O75452 317 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 BMP10O95393 424 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 STATHP02808 62 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ITGB2P05107 769 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 CTSBP07858 339 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 DHRS4L1P0CG22 281 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ATXN8OSP0DMR3 200 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SMIM10L1P0DMW3 83 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SFTPCP11686 197 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MMP11P24347 488 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ATP5A1P25705 553 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 HNRNPH1P31943 449 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 XCR1P46094 333 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SLC1A6P48664 564 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 NEK2P51955 445 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 HK2P52789 917 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 TRA2BP62995 288 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ACTN3Q08043 901 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ACSM2AQ08AH3 577 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SLAMF1Q13291 335 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 NKG7Q16617 165 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 UGT8Q16880 541 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MINDY4Q4G0A6 757 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SDK2Q58EX2 2172 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 CCNYL2Q5T2Q4 361 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 PRAMEF9Q5VWM5 478 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF385CQ66K41 422 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ACSM2BQ68CK6 577 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MRPL14Q6P1L8 145 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 INO80CQ6PI98 192 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 TRIM46Q7Z4K8 759 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 CUZD1Q86UP6 607 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 VASH2Q86V25 355 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 GPR180Q86V85 440 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 NUDT13Q86X67 352 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ZNF595Q8IYB9 648 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 FAM9CQ8IZT9 166 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ZCCHC7Q8N3Z6 543 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ARHGEF39Q8N4T4 335 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 METTL27Q8N6F8 245 aaPredicted RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ACOT4Q8N9L9 421 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 FAM76AQ8TAV0 307 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 WDR20Q8TBZ3 569 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MGARPQ8TDB4 240 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 LRRC8CQ8TDW0 803 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SNRNP27Q8WVK2 155 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 ARL8AQ96BM9 186 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MOCOSQ96EN8 888 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 SMIM10Q96HG1 83 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 FAIM2Q9BWQ8 316 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 OR51B5Q9H339 312 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 C12orf65Q9H3J6 166 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 KLHL31Q9H511 634 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 MANSC1Q9H8J5 431 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 INTS9Q9NV88 658 aaKnown RBP7.82□□□□□ -1.16
SF3A1-208ENST00000485618 HCN3Q9P1Z3 774 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 VTI1BQ9UEU0 232 aa7.82□□□□□ -1.16
SF3A1-208ENST00000485618 C3orf18Q9UK00 162 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms