RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 CDKL4Q5MAI5 379 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 CTAGE3PQ8IX95 158 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 SPATA6LQ8N4H0 392 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 CPSF7Q8N684 471 aaKnown RBP18.83■□□□□ 0.6
ACTB-212ENST00000484841 NFAM1Q8NET5 270 aaPredicted RBP18.83■□□□□ 0.6
ACTB-212ENST00000484841 OR2L5Q8NG80 312 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 PTCD3Q96EY7 689 aaKnown RBP18.83■□□□□ 0.6
ACTB-212ENST00000484841 SERINC2Q96SA4 455 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 EHD1Q9H4M9 534 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 WHRNQ9P202 907 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 RNF112Q9ULX5 631 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 ZNF835Q9Y2P0 537 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 NBPF19A0A087WUL8 3843 aa18.83■□□□□ 0.6
ACTB-212ENST00000484841 UNC79Q9P2D8 2635 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 TFECO14948 347 aaPredicted RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 PHGDHO43175 533 aaKnown RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 STK16O75716 305 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 PIAS1O75925 651 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 IFNA16P05015 189 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 AGAP20933 346 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 GRNP28799 593 aaKnown RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 HNRNPH1P31943 449 aaKnown RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 PTGER4P35408 488 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 GP5P40197 560 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 HSPA7P48741 367 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 MTTPP55157 894 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 PDK4Q16654 411 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 ZNF630Q2M218 657 aaPredicted RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 Q6ZPB1 254 aaPredicted RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 C3orf62Q6ZUJ4 267 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 ZNF595Q8IYB9 648 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 CYP4Z2PQ8N1L4 340 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 FAM47BQ8NA70 645 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 EXT2Q93063 718 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 RBBP8Q99708 897 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 ERP44Q9BS26 406 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 EFCAB11Q9BUY7 163 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 TRIM45Q9H8W5 580 aaPredicted RBP18.82■□□□□ 0.6
ACTB-212ENST00000484841 SMYD2Q9NRG4 433 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 ERVK-11Q9UQG0 969 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 MEMO1Q9Y316 297 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 SPACA6W5XKT8 324 aa18.82■□□□□ 0.6
ACTB-212ENST00000484841 C4orf51C9J302 202 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 TP73O15350 636 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 CCNT2O60583 730 aaKnown RBP18.81■□□□□ 0.6
ACTB-212ENST00000484841 ITGA10O75578 1167 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 WISP2O76076 250 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 ZFAND5O76080 213 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 SNRPB2P08579 225 aaKnown RBP18.81■□□□□ 0.6
ACTB-212ENST00000484841 GSTA2P09210 222 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 CD1DP15813 335 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 SPRP35270 261 aaPredicted RBP18.81■□□□□ 0.6
ACTB-212ENST00000484841 GGT5P36269 586 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 MEOX1P50221 254 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 SSR4P51571 173 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 MRPS25P82663 173 aaKnown RBP18.81■□□□□ 0.6
ACTB-212ENST00000484841 IRF8Q02556 426 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 STX4Q12846 297 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 CBLBQ13191 982 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 EFTUD2Q15029 972 aaKnown RBP eCLIP18.81■□□□□ 0.62e-36■■■■■ 41.3
ACTB-212ENST00000484841 RAPH1Q70E73 1250 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 GDF7Q7Z4P5 450 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 SCUBE1Q8IWY4 988 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 TMEM132CQ8N3T6 1108 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 SRFBP1Q8NEF9 429 aaKnown RBP18.81■□□□□ 0.6
ACTB-212ENST00000484841 NCLNQ969V3 563 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 TMEM79Q9BSE2 394 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 ROGDIQ9GZN7 287 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 ADAP2Q9NPF8 381 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 TIMMDC1Q9NPL8 285 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 UTP11Q9Y3A2 253 aaKnown RBP18.81■□□□□ 0.6
ACTB-212ENST00000484841 CLCA3PQ9Y6N3 262 aa18.81■□□□□ 0.6
ACTB-212ENST00000484841 TEX15Q9BXT5 2789 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 TCRBV9S1A1TA0A576 114 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 TAPBPO15533 448 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 TNNI3P19429 210 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 RAB10P61026 200 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 DOC2AQ14183 400 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 CLNKQ7Z7G1 428 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 SIAH3Q8IW03 269 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 APCDD1LQ8NCL9 501 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 DAZLQ92904 295 aaKnown RBP18.8■□□□□ 0.6
ACTB-212ENST00000484841 UBE2E3Q969T4 207 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 ESAMQ96AP7 390 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 GPR22Q99680 433 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 MCMBPQ9BTE3 642 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 AICDAQ9GZX7 198 aa18.8■□□□□ 0.6
ACTB-212ENST00000484841 YARS2Q9Y2Z4 477 aaKnown RBP18.8■□□□□ 0.6
ACTB-212ENST00000484841 A8MVJ9 347 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 CXorf49A8MYA2 514 aaPredicted RBP18.79■□□□□ 0.6
ACTB-212ENST00000484841 PEX1O43933 1283 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 CDC40O60508 579 aaKnown RBP eCLIP18.79■□□□□ 0.69e-7■■■□□ 18.5
ACTB-212ENST00000484841 CLDN14O95500 239 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 PRF1P14222 555 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 CERS1P27544 350 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 KCNC1P48547 511 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 LIM2P55344 173 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 ADORA2A-AS1P86434 159 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 HSF1Q00613 529 aa18.79■□□□□ 0.6
ACTB-212ENST00000484841 CAV1Q03135 178 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms