RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 SP140LQ9H930 580 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 TDP1Q9NUW8 608 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 OGDHLQ9ULD0 1010 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 UGT2A1Q9Y4X1 527 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 MPZL2O60487 215 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 UPK1BO75841 260 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 ARAFP10398 606 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 TGFBR1P36897 503 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 OR1E2P47887 323 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 LIMS1P48059 325 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 CDC20Q12834 499 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 CLPPQ16740 277 aaPredicted RBP18.85■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF181Q2M3W8 571 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 TRIM60Q495X7 471 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 TOR1AIP1Q5JTV8 583 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 LY6G5CQ5SRR4 150 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 CADM3Q8N126 398 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 OR9A1PQ8NGU1 263 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 MYLIPQ8WY64 445 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 PAK6Q9NQU5 681 aaPredicted RBP18.85■□□□□ 0.61
LIMS2-215ENST00000484252 DUSP12Q9UNI6 340 aa18.85■□□□□ 0.61
LIMS2-215ENST00000484252 NUP214P35658 2090 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-215ENST00000484252 LTBP2Q14767 1821 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 AGAP5A6NIR3 686 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 CCNB2O95067 398 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 SYN1P17600 705 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 PCBP3P57721 371 aaKnown RBP18.84■□□□□ 0.61
LIMS2-215ENST00000484252 IRF3Q14653 427 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 ARHGAP15Q53QZ3 475 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 NXPE4Q6UWF7 544 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 RNF130Q86XS8 419 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 WDR48Q8TAF3 677 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 UTP15Q8TED0 518 aaKnown RBP18.84■□□□□ 0.61
LIMS2-215ENST00000484252 SLC5A11Q8WWX8 675 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 CIDECQ96AQ7 238 aaPredicted RBP18.84■□□□□ 0.61
LIMS2-215ENST00000484252 CPNE5Q9HCH3 593 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 ACER3Q9NUN7 267 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 GPR83Q9NYM4 423 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 MARK1Q9P0L2 795 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 TBX21Q9UL17 535 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 ENPP4Q9Y6X5 453 aa18.84■□□□□ 0.61
LIMS2-215ENST00000484252 A0A1W2PRB8 838 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 SH3D21A4FU49 640 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 EFCAB10A6NFE3 127 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 PRAMEF25A6NGN4 478 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 CXCL14O95715 111 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 TGFB1P01137 390 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 STSP08842 583 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 ADORA3P0DMS8 318 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 EPHA5P54756 1037 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 TAS2R50P59544 299 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 CDC42P60953 191 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 MC1RQ01726 317 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 DNASE1L3Q13609 305 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 MPEG1Q2M385 716 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 ZNF367Q7RTV3 350 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 SLC22A16Q86VW1 577 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 CFAP206Q8IYR0 622 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 PSMA8Q8TAA3 256 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 SORCS1Q8WY21 1168 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 LINC00597Q9H2U6 94 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 HCFC1R1Q9NWW0 138 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 CNOT2Q9NZN8 540 aaKnown RBP18.83■□□□□ 0.61
LIMS2-215ENST00000484252 MAP4K5Q9Y4K4 846 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 PCDHGA3Q9Y5H0 932 aa18.83■□□□□ 0.61
LIMS2-215ENST00000484252 GADD45GO95257 159 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 RHCEP18577 417 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 CBLP22681 906 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 CASP9P55211 416 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 STARD3Q14849 445 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 TEAD2Q15562 447 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 SLC5A12Q1EHB4 618 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 INAVAQ3KP66 663 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 SETD7Q8WTS6 366 aaKnown RBP18.83■□□□□ 0.6
LIMS2-215ENST00000484252 DTD2Q96FN9 168 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 PPP1R16AQ96I34 528 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 FAM129BQ96TA1 746 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 YME1L1Q96TA2 773 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 OR51B5Q9H339 312 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 AMBNQ9NP70 447 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 GULP1Q9UBP9 304 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 ACSL6Q9UKU0 697 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 SH2B3Q9UQQ2 575 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 KLK4Q9Y5K2 254 aa18.83■□□□□ 0.6
LIMS2-215ENST00000484252 GBAP04062 536 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 RB1P06400 928 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 PTPN2P17706 415 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 IRS1P35568 1242 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 PCYT1AP49585 367 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 NUDT6P53370 316 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 ZNF45Q02386 682 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 ST3GAL4Q11206 333 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 TSTA3Q13630 321 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-215ENST00000484252 OR9Q2Q8NGE9 314 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 OTUB2Q96DC9 234 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 TCEAL4Q96EI5 215 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 COQ10AQ96MF6 247 aa18.82■□□□□ 0.6
LIMS2-215ENST00000484252 WRAP53Q9BUR4 548 aaKnown RBP18.82■□□□□ 0.6
LIMS2-215ENST00000484252 CCDC177Q9NQR7 707 aaPredicted RBP18.82■□□□□ 0.6
LIMS2-215ENST00000484252 ICKQ9UPZ9 632 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms