RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SVILO95425 2214 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 DOCK10Q96BY6 2186 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 A0A1W2PQ72 361 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ANKDD1BA6NHY2 528 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 GALR3O60755 368 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 GLRA3O75311 464 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ZGLP1P0C6A0 271 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ALOX12P18054 663 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 TAC1P20366 129 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 PTGER4P35408 488 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 CCT5P48643 541 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 TNFSF10P50591 281 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 PHEXP78562 749 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 MEF2AQ02078 507 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 EEF1A2Q05639 463 aaKnown RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 TGM3Q08188 693 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 CHIT1Q13231 466 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 DOC2AQ14183 400 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 SLBPQ14493 270 aaKnown RBP eCLIP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 RBBP5Q15291 538 aaKnown RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF630Q2M218 657 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 C18orf21Q32NC0 220 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ADPRMQ3LIE5 342 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF324BQ6AW86 544 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 FAAH2Q6GMR7 532 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 GRHL2Q6ISB3 625 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 BNC2Q6ZN30 1099 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 CROCCP2Q86T23 111 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 SLC22A9Q8IVM8 553 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 LAS2Q8IYD9 372 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF808Q8N4W9 903 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 AMER3Q8N944 861 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ANKRD53Q8N9V6 530 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 C7orf57Q8NEG2 295 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 STT3BQ8TCJ2 826 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ADAMTS18Q8TE60 1221 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 CREB3L4Q8TEY5 395 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 EXT2Q93063 718 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 GAL3ST3Q96A11 431 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 CCDC126Q96EE4 140 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 SCYL1Q96KG9 808 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 NPLQ9BXD5 320 aaPredicted RBP9.42□□□□□ -0.9
CPSF4-213ENST00000484112 ROGDIQ9GZN7 287 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 SEC14L3Q9UDX4 400 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 STK38LQ9Y2H1 464 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
CPSF4-213ENST00000484112 A0A0A6YYC8 382 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 LRIT2A6NDA9 550 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 H0YIV9 168 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 H3BQF6 201 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 I3L1I5 382 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 FFAR3O14843 346 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 GPR42O15529 346 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 RASAL1O95294 804 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 MED26O95402 600 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 CELA2AP08217 269 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 PRR35P0CG20 571 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 SMIM10L1P0DMW3 83 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 KRT15P19012 456 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 EPORP19235 508 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 JAK1P23458 1154 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 MST1P26927 711 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 PIK3CBP42338 1070 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 AP2B1P63010 937 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 GTF2H2Q13888 395 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 RCN2Q14257 317 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 ERCC6LQ2NKX8 1250 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 CCDC153Q494R4 210 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 TMEM35AQ53FP2 167 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 GTF2H2CQ6P1K8 395 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 MED27Q6P2C8 311 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 NDUFAF7Q7L592 441 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 TMEM151AQ8N4L1 468 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 TEX9Q8N6V9 391 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 PTGR2Q8N8N7 351 aaPredicted RBP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 L3MBTL4Q8NA19 623 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 KCT2Q8NC54 265 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 ZNF740Q8NDX6 193 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 OR51Q1Q8NH59 317 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 SUN3Q8TAQ9 357 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 RDH11Q8TC12 318 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 UTP15Q8TED0 518 aaKnown RBP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 PSMF1Q92530 271 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 HAS2Q92819 552 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 SMIM10Q96HG1 83 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 NTMT1Q9BV86 223 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 PARD6BQ9BYG5 372 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 SPNS1Q9H2V7 528 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 IPPKQ9H8X2 491 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 CPSF2Q9P2I0 782 aaKnown RBP9.41□□□□□ -0.9
CPSF4-213ENST00000484112 TRPC4Q9UBN4 977 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 MID2Q9UJV3 735 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 GRID1Q9ULK0 1009 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
CPSF4-213ENST00000484112 MRPS2Q9Y399 296 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms