RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 FREM3P0C091 2139 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 ADGRG4Q8IZF6 3080 aa16.81■□□□□ 0.28
ATG4B-221ENST00000483778 URADA6NGE7 173 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 CCDC166P0CW27 439 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 ESRRAP11474 423 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-221ENST00000483778 EPORP19235 508 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 HSPA7P48741 367 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 PLA2G16P53816 162 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 XKR6Q5GH73 641 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 NIPAL1Q6NVV3 410 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 XKRXQ6PP77 449 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 RPTNQ6XPR3 784 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 CLNKQ7Z7G1 428 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 ADAMTSL2Q86TH1 951 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 HORMAD2Q8N7B1 307 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 FAM47BQ8NA70 645 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 B3GNT7Q8NFL0 401 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 AGAP11Q8TF27 550 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 GAL3ST3Q96A11 431 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 RUNDC3BQ96NL0 473 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 F2RL3Q96RI0 385 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 CSF3RQ99062 836 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 NAPGQ99747 312 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-221ENST00000483778 DERL2Q9GZP9 239 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 DPH5Q9H2P9 285 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 PRTFDC1Q9NRG1 225 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 CSMD2Q7Z408 3487 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 NCKAP5O14513 1909 aa16.8■□□□□ 0.28
ATG4B-221ENST00000483778 INTS1Q8N201 2190 aaKnown RBP16.79■□□□□ 0.28
ATG4B-221ENST00000483778 NINQ8N4C6 2090 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 PHF3Q92576 2039 aaKnown RBP16.79■□□□□ 0.28
ATG4B-221ENST00000483778 CCDC188H7C350 402 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 CYR61O00622 381 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 FAM155BO75949 473 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 CD1DP15813 335 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 GGT5P36269 586 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 MEOX1P50221 254 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 CASP6P55212 293 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 GPX6P59796 221 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 STXBP1P61764 594 aaKnown RBP16.79■□□□□ 0.28
ATG4B-221ENST00000483778 DOC2AQ14183 400 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 TRADDQ15628 312 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 ADPRMQ3LIE5 342 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 MTFR2Q6P444 385 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 FRA10AC1Q70Z53 315 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 UBE3DQ7Z6J8 389 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 GPSM1Q86YR5 675 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 ZNF321PQ8N8H1 164 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 NCLNQ969V3 563 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 NT5DC2Q9H857 520 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 SAYSD1Q9NPB0 183 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 PRDM7Q9NQW5 492 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 KCMF1Q9P0J7 381 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 FBXW2Q9UKT8 454 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 MMACHCQ9Y4U1 282 aa16.79■□□□□ 0.28
ATG4B-221ENST00000483778 PINLYPA6NC86 204 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 PEX1O43933 1283 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 ITGA10O75578 1167 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 POU3F2P20265 443 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-221ENST00000483778 CERS1P27544 350 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 CLCN2P51788 898 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 RAB38P57729 211 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 GPR85P60893 370 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 POU4F1Q01851 419 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 DLG1Q12959 904 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 ABHD17CQ6PCB6 329 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 GHDCQ8N2G8 530 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 ARMC2Q8NEN0 867 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 PYROXD1Q8WU10 500 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 FAR2Q96K12 515 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 DMRTA2Q96SC8 542 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 NPLQ9BXD5 320 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-221ENST00000483778 TRIM8Q9BZR9 551 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 POPDC3Q9HBV1 291 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 DEPPQ9NTK1 212 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 DNAJC11Q9NVH1 559 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 GRHL1Q9NZI5 618 aa16.78■□□□□ 0.28
ATG4B-221ENST00000483778 PTBP2Q9UKA9 531 aaKnown RBP16.78■□□□□ 0.28
ATG4B-221ENST00000483778 PPIEQ9UNP9 301 aaKnown RBP16.78■□□□□ 0.28
ATG4B-221ENST00000483778 A0A1B0GTH9 108 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 HS6ST1O60243 411 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 SH3BGRLO75368 114 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 CLEC3AO75596 197 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 PDE9AO76083 593 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 ABOP16442 354 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 ZNF24P17028 368 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 PAFAH1B1P43034 410 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 LIM2P55344 173 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 SLC13A2Q13183 592 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 CMPK2Q5EBM0 449 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 SNX31Q8N9S9 440 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 FAM98AQ8NCA5 519 aaKnown RBP16.77■□□□□ 0.28
ATG4B-221ENST00000483778 OR2L5Q8NG80 312 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 TMEM125Q96AQ2 219 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 MTFMTQ96DP5 389 aaKnown RBP16.77■□□□□ 0.28
ATG4B-221ENST00000483778 UBXN10Q96LJ8 280 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 GPR22Q99680 433 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 REXO4Q9GZR2 422 aaKnown RBP16.77■□□□□ 0.28
ATG4B-221ENST00000483778 CHST11Q9NPF2 352 aa16.77■□□□□ 0.28
ATG4B-221ENST00000483778 WWOXQ9NZC7 414 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms