RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TNFP01375 233 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 HOXB3P14651 431 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-225ENST00000483495 UQCRC2P22695 453 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 TSFMP43897 325 aaKnown RBP12.6□□□□□ -0.39
CPNE1-225ENST00000483495 CRYBA2P53672 197 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 ILF3Q12906 894 aaKnown RBP eCLIP12.6□□□□□ -0.398e-7■■■■■ 39.4
CPNE1-225ENST00000483495 BIRC2Q13490 618 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 KIR2DS3Q14952 304 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 SLC5A12Q1EHB4 618 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 COX20Q5RI15 118 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 TRIM40Q6P9F5 258 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 ABHD17CQ6PCB6 329 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 IYDQ6PHW0 289 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 ZNF793Q6ZN11 406 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 PAQR7Q86WK9 346 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 ZDHHC21Q8IVQ6 265 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 AMER3Q8N944 861 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 JPH3Q8WXH2 748 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-225ENST00000483495 RDH12Q96NR8 316 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 SRMSQ9H3Y6 488 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 KLHL31Q9H511 634 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 USE1Q9NZ43 259 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 EHD3Q9NZN3 535 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 DUSP12Q9UNI6 340 aa12.6□□□□□ -0.39
CPNE1-225ENST00000483495 TNRC18O15417 2968 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-225ENST00000483495 PDPK1O15530 556 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 GCM2O75603 506 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ETFAP13804 333 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 DRD2P14416 443 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 CD6P30203 668 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 CAPGP40121 348 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 CRATP43155 626 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SSR2P43308 183 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PLA2G16P53816 162 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PPP2R2BQ00005 443 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 EEF1A2Q05639 463 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ELOAQ14241 798 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 MLC1Q15049 377 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 GCNT6Q5T4J0 391 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 MRM1Q6IN84 353 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 KRT80Q6KB66 452 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 USP51Q70EK9 711 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PIWIL3Q7Z3Z3 882 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 DHRSXQ8N5I4 330 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 OR2L5Q8NG80 312 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 OR5K1Q8NHB7 308 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PSMA8Q8TAA3 256 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 MAL2Q969L2 176 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 KCNC2Q96PR1 638 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 C17orf62Q9BQA9 187 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 OSBPL10Q9BXB5 764 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 FAM192AQ9GZU8 254 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ABCG4Q9H172 646 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 CHRDQ9H2X0 955 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 NEUROD4Q9HD90 331 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PRDM7Q9NQW5 492 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 ACSS1Q9NUB1 689 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 C2orf42Q9NWW7 574 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 TEX10Q9NXF1 929 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 HEATR5BQ9P2D3 2071 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PLXND1Q9Y4D7 1925 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 MYO10Q9HD67 2058 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 LRP4O75096 1905 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SPTY2D1-AS1A0A0U1RR47 76 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 TMEM229AB2RXF0 380 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 C4orf51C9J302 202 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PPM1DO15297 605 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 TNFSF14O43557 240 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 DPM1O60762 260 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 H6PDO95479 791 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SNAP29O95721 258 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SERPIND1P05546 499 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 GNAO1P09471 354 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 HIST1H1TP22492 207 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 DCTP40126 519 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 EIF2B5Q13144 721 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 APOFQ13790 326 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SPIDRQ14159 915 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 GAS6Q14393 721 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 TCEA2Q15560 299 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 OTUD3Q5T2D3 398 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 CCDC80Q76M96 950 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 STK32CQ86UX6 486 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SRFBP1Q8NEF9 429 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 OR10Q1Q8NGQ4 319 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 FAM174AQ8TBP5 190 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SDCCAG3Q96C92 435 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 HSH2DQ96JZ2 352 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 GPR174Q9BXC1 333 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 GSDMCQ9BYG8 508 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 MRPS26Q9BYN8 205 aaKnown RBP12.59□□□□□ -0.39
CPNE1-225ENST00000483495 SYNPO2LQ9H987 977 aa12.59□□□□□ -0.39
CPNE1-225ENST00000483495 LMAN1LQ9HAT1 526 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms