RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 DET1Q7L5Y6 550 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 REC114Q7Z4M0 266 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 POLNQ7Z5Q5 900 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 GPSM1Q86YR5 675 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SCUBE1Q8IWY4 988 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 GCNT2Q8N0V5 402 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 OR4N4Q8N0Y3 316 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 NPWQ8N729 165 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 LMO3Q8TAP4 145 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 CCHCR1Q8TD31 782 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 ZNF653Q96CK0 615 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 MMABQ96EY8 250 aaPredicted RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 FAM81BQ96LP2 452 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 TTC25Q96NG3 672 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 C11orf70Q9BRQ4 267 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 TRAF4Q9BUZ4 470 aaPredicted RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 IL1RL2Q9HB29 575 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 NKX1-2Q9UD57 310 aaPredicted RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 ZNF180Q9UJW8 692 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 DTX4Q9Y2E6 619 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 HEBP2Q9Y5Z4 205 aa5.88□□□□□ -1.47
CHD6-209ENST00000482596 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.88□□□□□ -1.47
CHD6-209ENST00000482596 HERC1Q15751 4861 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MGAT4DA6NG13 374 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 FRG2CA6NGY1 282 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 CD8B2A6NJW9 211 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 VSTM5A8MXK1 200 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 FCHO1O14526 889 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 PDE5AO76074 875 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 LY6HO94772 140 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MBD3O95983 291 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 EIF2S1P05198 315 aaKnown RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 RFPL3SP0C7P2 107 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 PIRTP0C851 137 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MMP8P22894 467 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 CASQ1P31415 396 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MTIF2P46199 727 aaKnown RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 CRYZQ08257 329 aaKnown RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 PDK1Q15118 436 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 NRF1Q16656 503 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MAN2A1Q16706 1144 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 ZNF474Q6S9Z5 364 aaPredicted RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 SASS6Q6UVJ0 657 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 GBP6Q6ZN66 633 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 ENOSF1Q7L5Y1 443 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MILR1Q7Z6M3 343 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 SNX32Q86XE0 403 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 CFAP206Q8IYR0 622 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 TMEM156Q8N614 296 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 TEX9Q8N6V9 391 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 RNF214Q8ND24 703 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 NEIL3Q8TAT5 605 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 NTAN1Q96AB6 310 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 INTS12Q96CB8 462 aaKnown RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 FAF2Q96CS3 445 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 VPS35Q96QK1 796 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 RBM4BQ9BQ04 359 aaKnown RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 NTMT1Q9BV86 223 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 SFXN3Q9BWM7 321 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 UBE2TQ9NPD8 197 aaPredicted RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 TMEM51Q9NW97 253 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 TUBA8Q9NY65 449 aaPredicted RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 C19orf25Q9UFG5 118 aaPredicted RBP5.87□□□□□ -1.47
CHD6-209ENST00000482596 DNPEPQ9ULA0 475 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 PLAGL1Q9UM63 463 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 MAPRE3Q9UPY8 281 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 SHOC2Q9UQ13 582 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 NINQ8N4C6 2090 aa5.87□□□□□ -1.47
CHD6-209ENST00000482596 SCN3AQ9NY46 2000 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 A0A0A6YYC8 382 aaPredicted RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 SLC5A10A0PJK1 596 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 VWC2LB2RUY7 222 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 C3orf84H3BNL1 204 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 I3L1I5 382 aaPredicted RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 J3KRW8 73 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 M0QZ24 198 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 PES1O00541 588 aaKnown RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 FOXS1O43638 330 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 UGT1A9O60656 530 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 RAC2P15153 192 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 UGT1A6P19224 532 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 SLC9A1P19634 815 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 MDKP21741 143 aaPredicted RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 RFC1P35251 1148 aaPredicted RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 ACTN3Q08043 901 aaPredicted RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 BOP1Q14137 746 aaKnown RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 EXOC3L4Q17RC7 722 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 MUM1Q2TAK8 710 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 DNAJC21Q5F1R6 531 aaKnown RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 MEI1Q5TIA1 1274 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 ADAM5Q6NVV9 412 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 TRIM65Q6PJ69 517 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 GK5Q6ZS86 529 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 RBM43Q6ZSC3 357 aaKnown RBP5.86□□□□□ -1.47
CHD6-209ENST00000482596 KIAA1328Q86T90 577 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 ZDHHC17Q8IUH5 632 aa5.86□□□□□ -1.47
CHD6-209ENST00000482596 OR5AR1Q8NGP9 310 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms