RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 SIGLEC14Q08ET2 396 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 TRAP1Q12931 704 aaKnown RBP3.16□□□□□ -1.9
COPA-204ENST00000481522 HYAL4Q2M3T9 481 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 FAAP20Q6NZ36 180 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 SLC25A47Q6Q0C1 308 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 FIP1L1Q6UN15 594 aaKnown RBP3.16□□□□□ -1.9
COPA-204ENST00000481522 ADCK2Q7Z695 626 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 HOGA1Q86XE5 327 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 OR10G8Q8NGN5 311 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 OR10Q1Q8NGQ4 319 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 OR1L3Q8NH93 324 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 RAET1EQ8TD07 263 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 CENPTQ96BT3 561 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 ZNF689Q96CS4 500 aaPredicted RBP3.16□□□□□ -1.9
COPA-204ENST00000481522 RADILQ96JH8 1075 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 C4orf45Q96LM5 186 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 EGFL8Q99944 293 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 SYT15Q9BQS2 421 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 TRIM4Q9C037 500 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 DNAJC4Q9NNZ3 241 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 PFDN4Q9NQP4 134 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 TMEM181Q9P2C4 612 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 POLLQ9UGP5 575 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 PPP2R2CQ9Y2T4 447 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 LIPGQ9Y5X9 500 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 PRSS21Q9Y6M0 314 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 RNF215Q9Y6U7 377 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 RIC1Q4ADV7 1423 aa3.16□□□□□ -1.9
COPA-204ENST00000481522 ACANP16112 2415 aa3.15□□□□□ -1.9
COPA-204ENST00000481522 GPRASP1Q5JY77 1395 aa3.15□□□□□ -1.9
COPA-204ENST00000481522 MYH14Q7Z406 1995 aaKnown RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 IGLV7-46A0A075B6I9 117 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 IGKV3D-20A0A0C4DH25 116 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 CCDC188H7C350 402 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ZNF195O14628 629 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 NXPH2O95156 264 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 SEC24AO95486 1093 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 GSRP00390 522 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ACAT1P24752 427 aaKnown RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 CDC25CP30307 473 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 GMPSP49915 693 aaPredicted RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 ZNF41P51814 821 aaPredicted RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 CLDN15P56746 228 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 UBASH3AP57075 661 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 MZT1Q08AG7 82 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ILF2Q12905 390 aaKnown RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 ITPK1Q13572 414 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ANGPT1Q15389 498 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ENPP7Q6UWV6 458 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 PTAR1Q7Z6K3 402 aaPredicted RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 SLFN11Q7Z7L1 901 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 KLHDC1Q8N7A1 406 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ZNF614Q8N883 585 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 IQUBQ8NA54 791 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 SLC37A3Q8NCC5 494 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 KIF18AQ8NI77 898 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 SMAP2Q8WU79 429 aaPredicted RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 AZIN2Q96A70 460 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 POM121L2Q96KW2 1035 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 C10orf90Q96M02 699 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 FER1L6-AS2Q96M78 137 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 RAB3IPQ96QF0 476 aaPredicted RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 LPAR4Q99677 370 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 MAP3K3Q99759 626 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 NKX3-1Q99801 234 aaPredicted RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 CCDC3Q9BQI4 270 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 GTPBP2Q9BX10 602 aaKnown RBP3.15□□□□□ -1.91
COPA-204ENST00000481522 TRIM15Q9C019 465 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 THAP2Q9H0W7 228 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 ANAPC5Q9UJX4 755 aa3.15□□□□□ -1.91
COPA-204ENST00000481522 MGAMO43451 1857 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 PIK3C2GO75747 1445 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 WNK1Q9H4A3 2382 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 H7C0S8 307 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 ATP6AP2O75787 350 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 KRT33AO76009 404 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 PENKP01210 267 aaPredicted RBP3.14□□□□□ -1.91
COPA-204ENST00000481522 VTNP04004 478 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 TRIM49P0CI25 452 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 TRIM49CP0CI26 452 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 PRKAR1AP10644 381 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 PTAFRP25105 342 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 PSMA3P25788 255 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 CD27P26842 260 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 DNA2P51530 1060 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 PAX9P55771 341 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 RASGEF1BQ0VAM2 473 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 NONOQ15233 471 aaKnown RBP eCLIP3.14□□□□□ -1.91
COPA-204ENST00000481522 ZNF74Q16587 644 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 HLA-BQ31612 363 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 WLSQ5T9L3 541 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 LYSMD4Q5XG99 296 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 TRIM65Q6PJ69 517 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 C11orf57Q6ZUT1 292 aaPredicted RBP3.14□□□□□ -1.91
COPA-204ENST00000481522 BTN2A1Q7KYR7 527 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 GTSCR1Q86UQ5 136 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 CCAR2Q8N163 923 aaKnown RBP3.14□□□□□ -1.91
COPA-204ENST00000481522 NME8Q8N427 588 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 ANKRD13CQ8N6S4 541 aa3.14□□□□□ -1.91
COPA-204ENST00000481522 OR7A2PQ8NGA2 310 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms